RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RAB38P57729 211 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 FAM205BPQ63HN1 556 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 OR5M10Q6IEU7 315 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM205Q6UW68 189 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 BEST3Q8N1M1 668 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 LSM14AQ8ND56 463 aaKnown RBP15.18■□□□□ 0.02
SCAF1-201ENST00000360565 OR1F2PQ96R84 312 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 SLA2Q9H6Q3 261 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 ALG5Q9Y673 324 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 KCNE1BA0A087WTH5 132 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TNFRSF4P43489 277 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 ACTBP60709 375 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 ACTG1P63261 375 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TLE3Q04726 772 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 PARM1Q6UWI2 310 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 FCRLAQ7L513 359 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM150AQ86TG1 271 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 OR2A1Q8NGT9 310 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 ABHD4Q8TB40 342 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 SYNPRQ8TBG9 265 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 SLC35A4Q96G79 324 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 NMNAT3Q96T66 252 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 ANKRD19PQ9H560 264 aa15.18■□□□□ 0.02
SCAF1-201ENST00000360565 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM72A0PK05 275 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 MEIS3P1A6NDR6 274 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 NARSO43776 548 aaKnown RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SLC16A7O60669 478 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SRPX2O60687 465 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 EN2P19622 333 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 GXYLT1Q4G148 440 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 CCDC58Q4VC31 144 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 WBP2NLQ6ICG8 309 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 EIF5AL1Q6IS14 154 aaKnown RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 C8orf82Q6P1X6 216 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 BTLAQ7Z6A9 289 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 OR5L2Q8NGL0 311 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 KCTD12Q96CX2 325 aaKnown RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 ELMOD3Q96FG2 381 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 C2orf42Q9NWW7 574 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 ABRACLQ9P1F3 81 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 CD207Q9UJ71 328 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 DAPP1Q9UN19 280 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 ACOT7O00154 380 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SCGB1D2O95969 90 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 TFP02787 698 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 PBX2P40425 430 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 AQP2P41181 271 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SLC6A8P48029 635 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SIRPAP78324 504 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 CCINQ13939 588 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 PRSS36Q5K4E3 855 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 LILRA6Q6PI73 481 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 IQCF2Q8IXL9 164 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 PATE1Q8WXA2 126 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 PMM1Q92871 262 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 HINT3Q9NQE9 182 aaKnown RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 DKKL1Q9UK85 242 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 RCE1Q9Y256 329 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM129A0AVI4 362 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 PEX12O00623 359 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 OR2T1O43869 369 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 CCNOP22674 350 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 MRPS21P82921 87 aaKnown RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 P2RY14Q15391 338 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 METTL11BQ5VVY1 283 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SFXN4Q6P4A7 337 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 DHRS4L2Q6PKH6 230 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 GDPD3Q7L5L3 318 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 ANKRD53Q8N9V6 530 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 SDF2Q99470 211 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 ABI3Q9P2A4 366 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 RABL2AQ9UBK7 228 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-201ENST00000360565 RABL2BQ9UNT1 228 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 RP1P56715 2156 aa15.17■□□□□ 0.02
SCAF1-201ENST00000360565 MAKP20794 623 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 VASPP50552 380 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-201ENST00000360565 ADPRHP54922 357 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 LIM2P55344 173 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 NKPD1Q17RQ9 610 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 TMEM215Q68D42 235 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 RPL22L1Q6P5R6 122 aaKnown RBP15.16■□□□□ 0.02
SCAF1-201ENST00000360565 ZNF836Q6ZNA1 936 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 OR52N1Q8NH53 320 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 PNPLA2Q96AD5 504 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 TREM1Q9NP99 234 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 AKIP1Q9NQ31 210 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 HPF1Q9NWY4 346 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 MBD1Q9UIS9 605 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-201ENST00000360565 RARRES3Q9UL19 164 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 POLHQ9Y253 713 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 MEGF11A6BM72 1044 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 UPK1AO00322 258 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 PAHP00439 452 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 CTHP32929 405 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 GRK5P34947 590 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 PSPHP78330 225 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 GLO1Q04760 184 aa15.16■□□□□ 0.02
SCAF1-201ENST00000360565 NKAPLQ5M9Q1 402 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms