RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 RPRD1BQ9NQG5 326 aaKnown RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CENPMQ9NSP4 180 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CCDC167Q9P0B6 97 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CDC42EP3Q9UKI2 254 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 GRIP1Q9Y3R0 1128 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 LYVE1Q9Y5Y7 322 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 COL7A1Q02388 2944 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 IQCMA0A1B0GVH7 501 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 ZNF587BE7ETH6 402 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 H7C0S8 307 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 EIF3FO00303 357 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 UBDO15205 165 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 EMC8O43402 210 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 LYPLA1O75608 230 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 ETHE1O95571 254 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 LBPP18428 481 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CD22P20273 847 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 MATN1P21941 496 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 ZNF84P51523 738 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 FOXA1P55317 472 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CLRN1P58418 232 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 TAS2R41P59536 307 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 REEP5Q00765 189 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 PCOLCEQ15113 449 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 OR4D1Q15615 310 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CYBRD1Q53TN4 286 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 EXOSC6Q5RKV6 272 aaKnown RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 KRT80Q6KB66 452 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 SLCO4C1Q6ZQN7 724 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 QSOX2Q6ZRP7 698 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 NANOGNBQ7Z5D8 188 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 VN1R4Q7Z5H5 301 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CDC20BQ86Y33 519 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 FAM86B1Q8N7N1 296 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 NEK7Q8TDX7 302 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 TFAP2CQ92754 450 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 C16orf58Q96GQ5 468 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 RNF145Q96MT1 663 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 ZNF607Q96SK3 696 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 WFDC6Q9BQY6 131 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CACNG6Q9BXT2 260 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 B3GNT4Q9C0J1 378 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 UBQLN4Q9NRR5 601 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 FARSBQ9NSD9 589 aaKnown RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 TMEM45AQ9NWC5 275 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 H2AFY2Q9P0M6 372 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 TMEM216Q9P0N5 145 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 NFKBIL1Q9UBC1 381 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 FOXD3Q9UJU5 478 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 FBXO9Q9UK97 447 aaPredicted RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 CNOT11Q9UKZ1 510 aaKnown RBP3.43□□□□□ -1.86
SMC1B-201ENST00000357450 FZR1Q9UM11 496 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 RNF115Q9Y4L5 304 aa3.43□□□□□ -1.86
SMC1B-201ENST00000357450 PRKDCP78527 4128 aaKnown RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 MAP1AP78559 2803 aaPredicted RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 FRAS1Q86XX4 4008 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 A0A0G2JMP0 313 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TRPC5OSA6NMA1 111 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 ATE1O95260 518 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 BPGMP07738 259 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 SBK2P0C263 348 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 UBL4AP11441 157 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TIA1P31483 386 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 IDH2P48735 452 aaKnown RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 KHKP50053 298 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 PKNOX1P55347 436 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 RAB25P57735 213 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 RPS4XP62701 263 aaKnown RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TUBA1BP68363 451 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TUBA4AP68366 448 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 MVKQ03426 396 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 GLO1Q04760 184 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 CLEC12BQ2HXU8 276 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 GLYR1Q49A26 553 aaPredicted RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 OR4F3Q6IEY1 312 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TMEM214Q6NUQ4 689 aaKnown RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TUBA1AQ71U36 451 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 FCRLAQ7L513 359 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 MTDHQ86UE4 582 aaKnown RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 KDM8Q8N371 416 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 AMER2Q8N7J2 671 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 ZNF321PQ8N8H1 164 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 SCCPDHQ8NBX0 429 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 OR56A1Q8NGH5 318 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 LILRB4Q8NHJ6 448 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 NEIL3Q8TAT5 605 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 ABHD5Q8WTS1 349 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 AKAP1Q92667 903 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 DDIT4LQ96D03 193 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 AURKBQ96GD4 344 aaPredicted RBP3.42□□□□□ -1.86
SMC1B-201ENST00000357450 BIRC8Q96P09 236 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 DUX5Q96PT3 197 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 RBP7Q96R05 134 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 EPYCQ99645 322 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 ACTRT3Q9BYD9 372 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 SPNS1Q9H2V7 528 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 TPK1Q9H3S4 243 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 HHATLQ9HCP6 504 aa3.42□□□□□ -1.86
SMC1B-201ENST00000357450 PLSCR3Q9NRY6 295 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms