RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RGS11O94810 467 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 KCNK2O95069 426 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 F3P13726 295 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SERPINA2P20848 420 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HIST1H1TP22492 207 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 GABRA2P47869 451 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 LTBQ06643 244 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC14A1Q13336 389 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 LSAMPQ13449 338 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 P2RY14Q15391 338 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MORN1Q5T089 497 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 AGBL5Q8NDL9 886 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MDGA1Q8NFP4 955 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 OR4D6Q8NGJ1 314 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 C4orf36Q96KX1 117 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 OR2M2Q96R28 347 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SAMD10Q9BYL1 202 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 TCEAL2Q9H3H9 227 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 LIN7BQ9HAP6 207 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 NOX3Q9HBY0 568 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 A0A0U1RQK1 487 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 A6NL46 340 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MCRIP1C9JLW8 97 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SLC16A7O60669 478 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 WDPCPO95876 746 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 HBG1P69891 147 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HBG2P69892 147 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 KCNJ8Q15842 424 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CLLU1OSQ5K130 101 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MANEAQ5SRI9 462 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ZNF585AQ6P3V2 769 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CDHR3Q6ZTQ4 885 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HSD11B1LQ7Z5J1 315 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 ZNF761Q86XN6 746 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 RNF175Q8N4F7 328 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 DTWD1Q8N5C7 304 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SIMC1Q8NDZ2 872 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 DOK4Q8TEW6 326 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SMAP2Q8WU79 429 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 ZNF566Q969W8 418 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 HHIPQ96QV1 700 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 SAV1Q9H4B6 383 aaPredicted RBP6.05□□□□□ -1.44
UPF2-201ENST00000356352 CLMPQ9H6B4 373 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 NIPAL2Q9H841 368 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 BABAM2Q9NXR7 383 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 CSNK1G3Q9Y6M4 447 aa6.05□□□□□ -1.44
UPF2-201ENST00000356352 MSTNO14793 375 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TIMM8AO60220 97 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 EIF1BO60739 113 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 C1orf105O95561 183 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 OPRD1P41143 372 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 HTR5AP47898 357 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TLE4Q04727 773 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.04□□□□□ -1.44
UPF2-201ENST00000356352 CBLL1Q75N03 491 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PARS2Q7L3T8 475 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 GPR155Q7Z3F1 870 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TMEM178AQ8NBL3 297 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 B3GNT7Q8NFL0 401 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 IL1F10Q8WWZ1 152 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PIGCQ92535 297 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PIGQQ9BRB3 760 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 CNTNAP3Q9BZ76 1288 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 NXF5Q9H1B4 397 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 DDX31Q9H8H2 851 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 SIDT1Q9NXL6 827 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 EHFQ9NZC4 300 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LRIT1Q9P2V4 623 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TMEM184BQ9Y519 407 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 LRRC37A3O60309 1634 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TSPAN11A1L157 253 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 AGAP14A8MT82 685 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 FAM171A2A8MVW0 826 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TSTD3H0UI37 97 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PTGESO14684 152 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 CHRM4P08173 479 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 MTHFD2P13995 350 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 BCKDHBP21953 392 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 HOXA11P31270 313 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 ETV5P41161 510 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 EIF1P41567 113 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 RPS5P46782 204 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 CLDN6P56747 220 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TNFRSF17Q02223 184 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 MBTPS1Q14703 1052 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLC10A1Q14973 349 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LIPIQ6XZB0 460 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 IDO2Q6ZQW0 420 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PGAP1Q75T13 922 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 WDR5BQ86VZ2 330 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 FAM109AQ8N4B1 249 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLC15A4Q8N697 577 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 DMBX1Q8NFW5 382 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 OR4A16Q8NH70 328 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 OR56B4Q8NH76 319 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 OR5K2Q8NHB8 316 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ZFPM2Q8WW38 1151 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PTERQ96BW5 349 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms