RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TFPIP10646 304 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 CXCR1P25024 350 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 HTR3AP46098 478 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 EIF1AXP47813 144 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 CDH12P55289 794 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.08■□□□□ 0.166e-6■□□□□ 8.6
PDLIM7-202ENST00000355841 IFI44LQ53G44 452 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 ALG10BQ5I7T1 473 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 ATG4DQ86TL0 474 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 DHFR2Q86XF0 187 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 ADAMTS16Q8TE57 1224 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 ARL5BQ96KC2 179 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 KLHL15Q96M94 604 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 OR5B2Q96R09 309 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 TRIB1Q96RU8 372 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 AMBRA1Q9C0C7 1298 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 TP63Q9H3D4 680 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 SERINC1Q9NRX5 453 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 SAMD4AQ9UPU9 718 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 UBR5O95071 2799 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 CLCA1A8K7I4 914 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 J3KTA2 159 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 ACOT8O14734 319 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 THY1P04216 161 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 ERFP50548 548 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 PIN1Q13526 163 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 ACSF3Q4G176 576 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 SYT14P1Q58G82 188 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 P3H2Q8IVL5 708 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 EID3Q8N140 333 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 MARVELD2Q8N4S9 558 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 OR10D3Q8NH80 312 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 GEMIN6Q8WXD5 167 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 ASB9Q96DX5 294 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 ADGRG7Q96K78 797 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 STOML1Q9UBI4 398 aa16.07■□□□□ 0.16
PDLIM7-202ENST00000355841 FLNCQ14315 2725 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 A0A0B4J2E0 115 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 A0A1B0GX12 115 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 AHRRA9YTQ3 701 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 CXCL13O43927 109 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 FMO6PO60774 539 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 WDR1O75083 606 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 FUT4P22083 530 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC7A1P30825 629 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 C1orf185Q5T7R7 199 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 HBMQ6B0K9 141 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 PPP4R4Q6NUP7 873 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 OR2V1Q8NHB1 315 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 PHF10Q8WUB8 498 aaKnown RBP16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 COQ10BQ9H8M1 238 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 EVA1AQ9H8M9 152 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC7A7Q9UM01 511 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 MEMO1Q9Y316 297 aa16.06■□□□□ 0.16
PDLIM7-202ENST00000355841 ELOA3DA6NLF2 546 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 hCG_2039718K7EN88 272 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ADAMDEC1O15204 470 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 IFNW1P05000 195 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 GABRA1P14867 456 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 SGCBQ16585 318 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ELOA3BQ3SY89 546 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 LCN8Q6JVE9 175 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ULK3Q6PHR2 472 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ESPNLQ6ZVH7 1005 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 SEM1Q6ZVN7 128 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ASRGL1Q7L266 308 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 CHMP1BQ7LBR1 199 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 TSEN54Q7Z6J9 526 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ELOA3Q8NG57 546 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 DNAJA4Q8WW22 397 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 OSTF1Q92882 214 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 PYURFQ96I23 114 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 SRXN1Q9BYN0 137 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 RHCGQ9UBD6 479 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ERRFI1Q9UJM3 462 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 KIAA1549Q9HCM3 1950 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 GJE1A6NN92 205 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 CARD18P57730 90 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 TAS2R41P59536 307 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 KCNC4Q03721 635 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 PMPCAQ10713 525 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 MYBPHQ13203 477 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 PON3Q15166 354 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 C4orf17Q53FE4 359 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 TENM4Q6N022 2769 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ZNF613Q6PF04 617 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 B3GNT6Q6ZMB0 384 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 WDR88Q6ZMY6 472 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 ZPLD1Q8TCW7 415 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 SEPHS2Q99611 448 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 TTYH2Q9BSA4 534 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 MUC13Q9H3R2 512 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 SELENONQ9NZV5 590 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 POMPQ9Y244 141 aa16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 SPIN1Q9Y657 262 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-202ENST00000355841 HIVEP3Q5T1R4 2406 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 TCRBV5S2A0A599 114 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 TRAPPC13A5PLN9 417 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 E9PLN8 166 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms