RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SMAD9O15198 467 aaKnown RBP17.47■□□□□ 0.39
PRPF39-201ENST00000355765 NDUFS4O43181 175 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 ATG12O94817 140 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 ZIC2O95409 532 aaPredicted RBP17.47■□□□□ 0.39
PRPF39-201ENST00000355765 CD53P19397 219 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 RECQLP46063 649 aaPredicted RBP17.47■□□□□ 0.39
PRPF39-201ENST00000355765 UBE3DQ7Z6J8 389 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 OR51L1Q8NGJ5 315 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 FIBINQ8TAL6 211 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 C1QTNF2Q9BXJ5 285 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 CPEB1Q9BZB8 566 aaKnown RBP17.47■□□□□ 0.39
PRPF39-201ENST00000355765 MOKQ9UQ07 419 aa17.47■□□□□ 0.39
PRPF39-201ENST00000355765 ABHD14A-ACY1A0A1B0GW23 586 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 ANKRD20A5PA0PJZ0 165 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 ACOD1A6NK06 481 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 TBX19O60806 448 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 NDUFB6O95139 128 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 PSMB10P40306 273 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 PTH2RP49190 550 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 P2RX1P51575 399 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 HFEQ30201 348 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 TMEM69Q5SWH9 247 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 C17orf64Q86WR6 236 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 PM20D2Q8IYS1 436 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 C2CD4CQ8TF44 421 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 CASD1Q96PB1 797 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 GFI1Q99684 422 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 SLC39A1Q9NY26 324 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 DENND4AQ7Z401 1863 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 BHLHE40O14503 412 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 LEFTY1O75610 366 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 NTSP30990 170 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 SSR2P43308 183 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 ART1P52961 327 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 ARSIQ5FYB1 569 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 ASTLQ6HA08 431 aaPredicted RBP17.46■□□□□ 0.39
PRPF39-201ENST00000355765 SLC8B1Q6J4K2 584 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 PXYLP1Q8TE99 480 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 NOX4Q9NPH5 578 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 MRPL17Q9NRX2 175 aaKnown RBP17.46■□□□□ 0.39
PRPF39-201ENST00000355765 ANKRD10Q9NXR5 420 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 FBXL3Q9UKT7 428 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 LHX6Q9UPM6 363 aa17.46■□□□□ 0.39
PRPF39-201ENST00000355765 COL4A3Q01955 1670 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 SLC22A31A6NKX4 558 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 SNRPGP15A8MWD9 76 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 ARL6IP5O75915 188 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 BMP7P18075 431 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 CRMP1Q14194 572 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 LTB4RQ15722 352 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 HAGHLQ6PII5 290 aaPredicted RBP17.46■□□□□ 0.38
PRPF39-201ENST00000355765 METTL3Q86U44 580 aaKnown RBP17.46■□□□□ 0.38
PRPF39-201ENST00000355765 TEX19Q8NA77 164 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 TMEM185AQ8NFB2 350 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 SIDT1Q9NXL6 827 aaKnown RBP17.46■□□□□ 0.38
PRPF39-201ENST00000355765 KLHL28Q9NXS3 571 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 HS3ST2Q9Y278 367 aa17.46■□□□□ 0.38
PRPF39-201ENST00000355765 K7ESM1 405 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 SYT5O00445 386 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 OR1F1O43749 312 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 TYRP1P17643 537 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 MPGP29372 298 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 MEOX2P50222 304 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 PDX1P52945 283 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 FOXK2Q01167 660 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 C9orf64Q5T6V5 341 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 SLC6A19Q695T7 634 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 GJD3Q8N144 294 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 MUC20Q8N307 709 aaPredicted RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 OR13C2Q8NGS9 318 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 OR2A12Q8NGT7 310 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 SYNPRQ8TBG9 265 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 TNFAIP8L1Q8WVP5 186 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 SOCS4Q8WXH5 440 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 FAM83CQ9BQN1 747 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 CXXC1Q9P0U4 656 aaPredicted RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 NDRG3Q9UGV2 375 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 LSM7Q9UK45 103 aaKnown RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 OR10H1Q9Y4A9 318 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 DISC1C4P0D8 188 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 IL5P05113 134 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 HOXB1P14653 301 aaPredicted RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 NAA10P41227 235 aaPredicted RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 RAB13P51153 203 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 RPS11P62280 158 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 SREBF2Q12772 1141 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 CBFBQ13951 182 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 WDR88Q6ZMY6 472 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 DNAAF1Q8NEP3 725 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 OR2AK2Q8NG84 335 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 ZMYND19Q96E35 227 aaPredicted RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 TSNAXQ99598 290 aaKnown RBP17.45■□□□□ 0.38
PRPF39-201ENST00000355765 SLC25A13Q9UJS0 675 aa17.45■□□□□ 0.38
PRPF39-201ENST00000355765 TRAV27A0A087WT01 109 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 LINC00587B1AMM8 73 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 LATS1O95835 1130 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 TMIGD3P0DMS9 266 aaPredicted RBP17.44■□□□□ 0.38
PRPF39-201ENST00000355765 CDK2P24941 298 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 MC3RP41968 323 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 FLT3LGP49771 235 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms