RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 A0A1B0GTW7 788 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ZBTB42B2RXF5 422 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 J3KTA2 159 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 PTTG1O95997 202 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ALKAL1Q6UXT8 129 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 LINC00696Q6ZRV3 163 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ASB17Q8WXJ9 295 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 PRMT8Q9NR22 394 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-202ENST00000355480 G3V3Y1 287 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 GFRA2O00451 464 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ELP2Q6IA86 826 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 AAED1Q7RTV5 226 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 GPR155Q7Z3F1 870 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 SULF2Q8IWU5 870 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 DNAJC22Q8N4W6 341 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 CCDC163A0A0D9SF12 145 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ARPC1BO15143 372 aaKnown RBP16.81■□□□□ 0.28
COL18A1-202ENST00000355480 TP53P04637 393 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-202ENST00000355480 STEAP2Q8NFT2 490 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 PSMF1Q92530 271 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF566Q969W8 418 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 PRRT1Q99946 306 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 INPP5EQ9NRR6 644 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 DHCR7Q9UBM7 475 aaKnown RBP16.81■□□□□ 0.28
COL18A1-202ENST00000355480 OR6C6A6NF89 314 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 CYB5BO43169 146 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 TCN2P20062 427 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 SSTR4P31391 388 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 DLSTP36957 453 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 TSSK4Q6SA08 328 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 GAREM2Q75VX8 874 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ABHD11Q8NFV4 315 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 OR13C2Q8NGS9 318 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 OR14K1Q8NGZ2 314 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 EMC9Q9Y3B6 208 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 NUBP2Q9Y5Y2 271 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ANKRD34BA5PLL1 514 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 PAHP00439 452 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 CDK1P06493 297 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 PTPN6P29350 595 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 MEF2DQ14814 521 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 RFLNAQ6ZTI6 216 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 TPRA1Q86W33 373 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 AMDHD1Q96NU7 426 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 AGPAT4Q9NRZ5 378 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 ASF1BQ9NVP2 202 aa16.81■□□□□ 0.28
COL18A1-202ENST00000355480 NOSIPQ9Y314 301 aaKnown RBP16.81■□□□□ 0.28
COL18A1-202ENST00000355480 F11P03951 625 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 CD79BP40259 229 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 FNDC8Q8TC99 324 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 THAP7Q9BT49 309 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-202ENST00000355480 SDHAF2Q9NX18 166 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 SPDEFO95238 335 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 IMPA1P29218 277 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 TACR3P29371 465 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 MRPS10P82664 201 aaKnown RBP16.8■□□□□ 0.28
COL18A1-202ENST00000355480 KIF18BQ86Y91 864 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 SLC22A12Q96S37 553 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 LIPCP11150 499 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 RPL23AP62750 156 aaKnown RBP16.8■□□□□ 0.28
COL18A1-202ENST00000355480 SLC41A2Q96JW4 573 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 FER1L6-AS2Q96M78 137 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 FGF21Q9NSA1 209 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 F10P00742 488 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF534Q76KX8 674 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 COX15Q7KZN9 410 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 KLHDC9Q8NEP7 349 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 GTF2H4Q92759 462 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 SORCS2Q96PQ0 1159 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 HDAC8Q9BY41 377 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 OLAHQ9NV23 265 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 BABAM2Q9NXR7 383 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 MYO9BQ13459 2157 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 A0A0U1RQK1 487 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 AP1G1O43747 822 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 BCAS1O75363 584 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-202ENST00000355480 HLA-DMAP28067 261 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 CST9Q5W186 159 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 RTL6Q6ICC9 239 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 NDUFAF7Q7L592 441 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 OR11L1Q8NGX0 322 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 LKAAEAR1Q8TD35 194 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 STK35Q8TDR2 534 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 CTRCQ99895 268 aa16.8■□□□□ 0.28
COL18A1-202ENST00000355480 ESCO2Q56NI9 601 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 CD163Q86VB7 1156 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 ACBD4Q8NC06 268 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 OR4F15Q8NGB8 312 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 MSI2Q96DH6 328 aaKnown RBP16.79■□□□□ 0.28
COL18A1-202ENST00000355480 NXT1Q9UKK6 140 aaKnown RBP16.79■□□□□ 0.28
COL18A1-202ENST00000355480 RASD1Q9Y272 281 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 CEBPZOSA8MTT3 80 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 PKLRP30613 574 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 RAB5BP61020 215 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 RRAS2P62070 204 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-202ENST00000355480 CXADRP78310 365 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 SIRPAP78324 504 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 FRMPD2BQ6IN97 320 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 FAM111BQ6SJ93 734 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms