RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 NMNAT3Q96T66 252 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 ULBP2Q9BZM5 246 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 SLC22A4Q9H015 551 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 NXF5Q9H1B4 397 aaKnown RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 STUB1Q9UNE7 303 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 AK6Q9Y3D8 172 aaKnown RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 CEP250Q9BV73 2442 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 IGHV5-51A0A0C4DH38 117 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 RGS9O75916 674 aaPredicted RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 TMBIM6P55061 237 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 E2F1Q01094 437 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 PRKCDQ05655 676 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 KEAP1Q14145 624 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 GLYR1Q49A26 553 aaPredicted RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 CHDHQ8NE62 594 aaPredicted RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 CCDC54Q8NEL0 328 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 C16orf52Q8NHV5 167 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 CASTOR1Q8WTX7 329 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 TM9SF4Q92544 642 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 SDF2Q99470 211 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 A4GALTQ9NPC4 353 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 SIDT1Q9NXL6 827 aaKnown RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 IGHV3-9P01782 118 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 CHRM4P08173 479 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 CLDN17P56750 224 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 SFTPA2Q8IWL1 248 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 ADGRF3Q8IZF5 1079 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 ZSCAN4Q8NAM6 433 aaPredicted RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 PAPD5Q8NDF8 572 aaKnown RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 TRUB1Q8WWH5 349 aaKnown RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 PCDHGB2Q9Y5G2 931 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 NPFFR2Q9Y5X5 522 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 ELAVL4P26378 380 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 HTR3AP46098 478 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 CYB561P49447 251 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 PAQR7Q86WK9 346 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 SLITRK4Q8IW52 837 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 PFN4Q8NHR9 129 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 CDH20Q9HBT6 801 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 HHATLQ9HCP6 504 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 THSD1Q9NS62 852 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 KLHL13Q9P2N7 655 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 EIF3KQ9UBQ5 218 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 C19orf53Q9UNZ5 99 aaPredicted RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 A0A1B0GVC2 190 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 A6NIN4 97 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 TMEM225BP0DP42 221 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 TRHRP34981 398 aaPredicted RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 TRIM23P36406 574 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 TSPAN31Q12999 210 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ZNF829Q3KNS6 432 aaPredicted RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 TMEM71Q6P5X7 295 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 FER1L6-AS2Q96M78 137 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 OR2A14Q96R47 310 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 TRPV4Q9HBA0 871 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ZNF69Q9UC07 566 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 TMPRSS11EQ9UL52 423 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 SVILO95425 2214 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 MEN1O00255 615 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 GATBO75879 557 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 MCCD1P59942 119 aaPredicted RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 PIWIL3Q7Z3Z3 882 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 YRDCQ86U90 279 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 TMEM102Q8N9M5 508 aaPredicted RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 OR5W2Q8NH69 310 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 CLCC1Q96S66 551 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 CALHM2Q9HA72 323 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ASIC5Q9NY37 505 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 UBAP1Q9NZ09 502 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 ZNF639Q9UID6 485 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 UPK1AO00322 258 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 P2RX6O15547 441 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 MSX1P28360 303 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 BCAP31P51572 246 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 GABARAPL2P60520 117 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ANKRD34AQ69YU3 496 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ZNF322Q6U7Q0 402 aaPredicted RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 PRICKLE2Q7Z3G6 844 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 CADM4Q8NFZ8 388 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 SMURF1Q9HCE7 757 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 SEMA4GQ9NTN9 838 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 POLHQ9Y253 713 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 MED16Q9Y2X0 877 aa12.68□□□□□ -0.38
SMC6-201ENST00000351948 ZNF638Q14966 1978 aaKnown RBP12.68□□□□□ -0.38
SMC6-201ENST00000351948 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 ZNF613Q6PF04 617 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 TMEM17Q86X19 198 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 SPARTQ8N0X7 666 aa12.67□□□□□ -0.38
SMC6-201ENST00000351948 ZNF420Q8TAQ5 688 aaPredicted RBP12.67□□□□□ -0.38
SMC6-201ENST00000351948 TRMT10AQ8TBZ6 339 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms