RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 CCL4P13236 92 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 GTF2E2P29084 291 aaKnown RBP15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 SLC6A6P31641 620 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 SLC3A1Q07837 685 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 EBPQ15125 230 aaKnown RBP15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 ALDH16A1Q8IZ83 802 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 ISG20L2Q9H9L3 353 aaKnown RBP15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 SLC22A11Q9NSA0 550 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 DIMT1Q9UNQ2 313 aaKnown RBP15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 FITM1A5D6W6 292 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 E9PQ18 207 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 ALOX12BO75342 701 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 CXCR1P25024 350 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 SLC15A1P46059 708 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 TRIM16LQ309B1 348 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 C1QL3Q5VWW1 255 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 BICRALQ6AI39 1079 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 PHC2Q8IXK0 858 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 ZNF721Q8TF20 911 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 UFD1Q92890 307 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 KATNB1Q9BVA0 655 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 SRA1Q9HD15 236 aaKnown RBP15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 ZNF229Q9UJW7 825 aa15.73■□□□□ 0.11
SMARCC2-202ENST00000347471 LALBAP00709 142 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ACVR1BP36896 505 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 PRKCDQ05655 676 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 RAB40BQ12829 278 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 IRF3Q14653 427 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ZNF846Q147U1 533 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 MOSPD2Q8NHP6 518 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 C3orf49Q96BT1 292 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 MVB12AQ96EY5 273 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 GALNT9Q9HCQ5 603 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ZNF223Q9UK11 482 aaPredicted RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 TRBV11-1A0A0K0K1C0 115 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 MASP2O00187 686 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 SCG5P05408 212 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 HIST1H1CP16403 213 aaKnown RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 IGLV3-21P80748 117 aaPredicted RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 RHAGQ02094 409 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 WDR74Q6RFH5 385 aaPredicted RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 RNF113BQ8IZP6 322 aaKnown RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 KDM8Q8N371 416 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ZNF768Q9H5H4 540 aaKnown RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ERVMER34-1Q9H9K5 563 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 POLE3Q9NRF9 147 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 SRPK3Q9UPE1 567 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 IFNGP01579 166 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ABCD3P28288 659 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 GPR143P51810 404 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 FBXW4P57775 412 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 TMEM201Q5SNT2 666 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 RPTNQ6XPR3 784 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 QSOX2Q6ZRP7 698 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 KLHL36Q8N4N3 616 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 TOR1AIP2Q8NFQ8 470 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 WWTR1Q9GZV5 400 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 ARRDC1-AS1Q9H2J1 176 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 CCDC86Q9H6F5 360 aaKnown RBP15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 TMEM185BQ9H7F4 350 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 MALT1Q9UDY8 824 aa15.72■□□□□ 0.11
SMARCC2-202ENST00000347471 CASKO14936 926 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 LIMS3P0CW19 117 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 LIMS4P0CW20 117 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 HK1P19367 917 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 DCDP81605 110 aaKnown RBP15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 DTX3Q8N9I9 347 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 RHBDD1Q8TEB9 315 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 MOGAT1Q96PD6 335 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 SLIRPQ9GZT3 109 aaKnown RBP15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 RAB33BQ9H082 229 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 ABCB9Q9NP78 766 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 MN1Q10571 1320 aaPredicted RBP15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 TCRBV16S1A1N1A0A5B0 115 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 HIST1H2ABP04908 130 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 PYCR1P32322 319 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 RPS27P42677 84 aaKnown RBP15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 ZNF141Q15928 474 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 CARTPTQ16568 116 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 AADACL4Q5VUY2 407 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 LCN10Q6JVE6 187 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 HIST3H2AQ7L7L0 130 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 ACBD7Q8N6N7 88 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 HIST1H2ACQ93077 130 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 Q96M85 177 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 SLC35A3Q9Y2D2 325 aa15.71■□□□□ 0.11
SMARCC2-202ENST00000347471 NDUFB2O95178 105 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 OCM2P0CE71 109 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 OCMP0CE72 109 aaPredicted RBP15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 PIPP12273 146 aaPredicted RBP15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 RPS19P39019 145 aaKnown RBP15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 HNRNPA0Q13151 305 aaKnown RBP15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 OR7G1Q8NGA0 311 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 LPAR4Q99677 370 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 ALG8Q9BVK2 526 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 OR11A1Q9GZK7 315 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 KLRF1Q9NZS2 232 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 GRIP1Q9Y3R0 1128 aa15.71■□□□□ 0.1
SMARCC2-202ENST00000347471 BLACEA4D250 179 aa15.7■□□□□ 0.1
SMARCC2-202ENST00000347471 SHISA8B8ZZ34 492 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms