RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 KCNN2Q9H2S1 579 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 SEC16AO15027 2179 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 PRAMEF2O60811 474 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 SC5DO75845 299 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 SOX30O94993 753 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 RCVRNP35243 200 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 ABHD4Q8TB40 342 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 TCTN2Q96GX1 697 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF486Q96H40 463 aaPredicted RBP14.18□□□□□ -0.14
UPF3B-202ENST00000345865 Q9N2J8 555 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF221Q9UK13 617 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 BAIAP2Q9UQB8 552 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 IER3IP1Q9Y5U9 82 aa14.18□□□□□ -0.14
UPF3B-202ENST00000345865 IGHV5-51A0A0C4DH38 117 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 CSTAP01040 98 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 PROS1P07225 676 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 MAOBP27338 520 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 PYCR1P32322 319 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 FASLGP48023 281 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 RIN1Q13671 783 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 LCN1P1Q5VSP4 162 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 DMKNQ6E0U4 476 aaPredicted RBP14.17□□□□□ -0.14
UPF3B-202ENST00000345865 ARHGAP11AQ6P4F7 1023 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 METAP1DQ6UB28 335 aaPredicted RBP14.17□□□□□ -0.14
UPF3B-202ENST00000345865 TRILQ7L0X0 811 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF550Q7Z398 422 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 GHDCQ8N2G8 530 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 DTX3Q8N9I9 347 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF285Q96NJ3 590 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF576Q9H609 170 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 EVA1AQ9H8M9 152 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 MRPS33Q9Y291 106 aaKnown RBP14.17□□□□□ -0.14
UPF3B-202ENST00000345865 MTCH2Q9Y6C9 303 aa14.17□□□□□ -0.14
UPF3B-202ENST00000345865 A0A087WUJ7 227 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 IGHV1OR15-9A0A0B4J2B8 117 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 A0A0G2JK05 382 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 SERINC4A6NH21 518 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 CHURC1-FNTBB4DL54 471 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 FAM157BP0CG42 384 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 GLULP15104 373 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 CFL1P23528 166 aaKnown RBP14.16□□□□□ -0.14
UPF3B-202ENST00000345865 RPS5P46782 204 aaKnown RBP14.16□□□□□ -0.14
UPF3B-202ENST00000345865 FNTBP49356 437 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 COL19A1Q14993 1142 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 MZT2AQ6P582 158 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 SYT13Q7L8C5 426 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 CEACAM19Q7Z692 300 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 PXKQ7Z7A4 578 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 GPALPP1Q8IXQ4 340 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF321PQ8N8H1 164 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 SCAIQ8N9R8 606 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 GATSQ8NAP1 163 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 ZPLD1Q8TCW7 415 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 TP53INP1Q96A56 240 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 TMEM43Q9BTV4 400 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 SPRTNQ9H040 489 aaPredicted RBP14.16□□□□□ -0.14
UPF3B-202ENST00000345865 RNF121Q9H920 327 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 ST6GALNAC2Q9UJ37 374 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 OR10H1Q9Y4A9 318 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 A0A0G2JMP0 313 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 A0A0X1KG70 313 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 CLDN4O14493 209 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 NDUFB2O95178 105 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 GSTT2P0CG29 244 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 GSTT2BP0CG30 244 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 F8A1P23610 371 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 MYL9P24844 172 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 TP53I3Q53FA7 332 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 TRIQKQ629K1 86 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 HBMQ6B0K9 141 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 FAM98AQ8NCA5 519 aaKnown RBP14.16□□□□□ -0.14
UPF3B-202ENST00000345865 OR4M2Q8NGB6 313 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 OR6C4Q8NGE1 309 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 OR51Q1Q8NH59 317 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 LMX1AQ8TE12 382 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 GHSRQ92847 366 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 C3orf49Q96BT1 292 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 ZNF524Q96C55 264 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 TGM7Q96PF1 710 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 KCNJ15Q99712 375 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 G6PC3Q9BUM1 346 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 RPS6KB2Q9UBS0 482 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 ICAM5Q9UMF0 924 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 PCDHGB7Q9Y5F8 929 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 MAU2Q9Y6X3 613 aa14.16□□□□□ -0.14
UPF3B-202ENST00000345865 A0A1B0GVC2 190 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 A6NIN4 97 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 FAM25AB3EWG3 89 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 FAM25CB3EWG5 89 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 FAM25GB3EWG6 89 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 OIP5O43482 229 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 PAHP00439 452 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 IFNA16P05015 189 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 KRT8P05787 483 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 EIF4EP06730 217 aaKnown RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 TFPIP10646 304 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 NAA10P41227 235 aaPredicted RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 TBRG1Q3YBR2 411 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 SLC2A12Q8TD20 617 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 CAPSLQ8WWF8 208 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms