RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ANKRA2Q9H9E1 313 aa13.57□□□□□ -0.24
PBX3-201ENST00000342287 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
PBX3-201ENST00000342287 BIN3Q9NQY0 253 aa13.57□□□□□ -0.24
PBX3-201ENST00000342287 SNTG1Q9NSN8 517 aa13.57□□□□□ -0.24
PBX3-201ENST00000342287 MALT1Q9UDY8 824 aa13.57□□□□□ -0.24
PBX3-201ENST00000342287 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
PBX3-201ENST00000342287 PRAMEF27A3QJZ7 478 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 BLACEA4D250 179 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 HPGDP15428 266 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 RPS19P39019 145 aaKnown RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 RFX4Q33E94 735 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 LGALSLQ3ZCW2 172 aaPredicted RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 SHQ1Q6PI26 577 aaKnown RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 LGI4Q8N135 537 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 D2HGDHQ8N465 521 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 C19orf18Q8NEA5 215 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 OR5T2Q8NGG2 359 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 ADAMTS18Q8TE60 1221 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 ANKRD9Q96BM1 317 aaPredicted RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 TREX2Q9BQ50 279 aaPredicted RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 BARHL1Q9BZE3 327 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 PIGUQ9H490 435 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 EQTNQ9NQ60 294 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 BABAM2Q9NXR7 383 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 HCN3Q9P1Z3 774 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 FBXL2Q9UKC9 423 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 PPIEQ9UNP9 301 aaKnown RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 MRPS33Q9Y291 106 aaKnown RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 CACNA1EQ15878 2313 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 EIF3GO75821 320 aaKnown RBP eCLIP13.56□□□□□ -0.24
PBX3-201ENST00000342287 DIRAS1O95057 198 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 ITGAMP11215 1152 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 MAN2A2P49641 1150 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 ITGA1P56199 1179 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 ZNF628Q5EBL2 1059 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 MMABQ96EY8 250 aaPredicted RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 SLC41A2Q96JW4 573 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 MS4A4EQ96PG1 132 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 OR7D2Q96RA2 312 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 DPYSL5Q9BPU6 564 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 PAPOLGQ9BWT3 736 aaKnown RBP13.56□□□□□ -0.24
PBX3-201ENST00000342287 ABCB9Q9NP78 766 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 ENAMQ9NRM1 1142 aa13.56□□□□□ -0.24
PBX3-201ENST00000342287 DUXAA6NLW8 204 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 POM121CA8CG34 1229 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 TMEM150CB9EJG8 249 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 H0YIG0 161 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 DNAJA1P31689 397 aaKnown RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 BPIFB3P59826 476 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 PSPHP78330 225 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 DEFA5Q01523 94 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 HSF2Q03933 536 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 HFEQ30201 348 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 ZNF528Q3MIS6 628 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 VASNQ6EMK4 673 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 MAMDC2Q7Z304 686 aaPredicted RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 NSMAFQ92636 917 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 PEX11GQ96HA9 241 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 BARD1Q99728 777 aaKnown RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 MND1Q9BWT6 205 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 ASPNQ9BXN1 380 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 MED28Q9H204 178 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 BCL2L10Q9HD36 194 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 VNN3Q9NY84 501 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 NDUFAF4Q9P032 175 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 CMAHPQ9Y471 501 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 A0A087WV62 115 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 INMT-MINDY4F8WBC2 141 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 ACAA1P09110 424 aaPredicted RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 SLC35E2P0CK97 266 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 NT5EP21589 574 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 OR1E2P47887 323 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 MXD1Q05195 221 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 TRMT12Q53H54 448 aaKnown RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 SLC6A19Q695T7 634 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 TMEM71Q6P5X7 295 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 FAM111BQ6SJ93 734 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 ZNF595Q8IYB9 648 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 SLC34A3Q8N130 599 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 GHDCQ8N2G8 530 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 BBS10Q8TAM1 723 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 OTUB1Q96FW1 271 aaPredicted RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 REEP1Q9H902 201 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 THSD1Q9NS62 852 aa13.55□□□□□ -0.24
PBX3-201ENST00000342287 C19orf53Q9UNZ5 99 aaPredicted RBP13.55□□□□□ -0.24
PBX3-201ENST00000342287 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
PBX3-201ENST00000342287 EFCAB7A8K855 629 aa13.54□□□□□ -0.24
PBX3-201ENST00000342287 PATE3B3GLJ2 98 aa13.54□□□□□ -0.24
PBX3-201ENST00000342287 H3BMH7 237 aa13.54□□□□□ -0.24
PBX3-201ENST00000342287 CLDN4O14493 209 aa13.54□□□□□ -0.24
PBX3-201ENST00000342287 TOX3O15405 576 aaPredicted RBP13.54□□□□□ -0.24
PBX3-201ENST00000342287 CTNSO60931 367 aa13.54□□□□□ -0.24
PBX3-201ENST00000342287 WBP4O75554 376 aaKnown RBP13.54□□□□□ -0.24
PBX3-201ENST00000342287 KDM4BO94953 1096 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms