RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 RYDENQ9NUL5 291 aaKnown RBP15.79■□□□□ 0.12
CLDN4-201ENST00000340958 STMN3Q9NZ72 180 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 RNF6Q9Y252 685 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 PKD1L2Q7Z442 2459 aa15.79■□□□□ 0.12
CLDN4-201ENST00000340958 CDC42EP2O14613 210 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 MASP1P48740 699 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 POLR2HP52434 150 aaKnown RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 MAD2L1BPQ15013 274 aaPredicted RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 RBM48Q5RL73 367 aaKnown RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 ABHD17BQ5VST6 288 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SLC30A6Q6NXT4 461 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SLC27A4Q6P1M0 643 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 LINC00114Q6XXX2 140 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 OAFQ86UD1 273 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 KIF18BQ86Y91 864 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 CCDC71Q8IV32 467 aaPredicted RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 ENTHD1Q8IYW4 607 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 CYP4Z2PQ8N1L4 340 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 OR4K17Q8NGC6 315 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 UBE2FQ969M7 185 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SECISBP2Q96T21 854 aaKnown RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 KLHDC3Q9BQ90 382 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 ZNF426Q9BUY5 554 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 TSSK6Q9BXA6 273 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 PRRG3Q9BZD7 231 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 TVP23BQ9NYZ1 205 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 AASSQ9UDR5 926 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 KMT2BQ9UMN6 2715 aaPredicted RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 KLF4O43474 513 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 AHCYL1O43865 530 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 MPZL2O60487 215 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 P04436 131 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 PRKAR1AP10644 381 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 FMO3P31513 532 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 CASRP41180 1078 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 HTR3AP46098 478 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 GIPRP48546 466 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 GAS1P54826 345 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 KCTD21Q4G0X4 260 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 BROXQ5VW32 411 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SLX4IPQ5VYV7 408 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 H3F3CQ6NXT2 135 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 RTL4Q6ZR62 310 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 TMPRSS11FQ6ZWK6 438 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 GRINAQ7Z429 371 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 BEST3Q8N1M1 668 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 OR13C2Q8NGS9 318 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 OR51A7Q8NH64 312 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SNIP1Q8TAD8 396 aaKnown RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SGCZQ96LD1 299 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 JSRP1Q96MG2 331 aaPredicted RBP15.78■□□□□ 0.12
CLDN4-201ENST00000340958 PLA2G12AQ9BZM1 189 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SLC19A3Q9BZV2 496 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 LHPPQ9H008 270 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 ADAM19Q9H013 955 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 PTGES2Q9H7Z7 377 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 C12orf10Q9HB07 376 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 SCN3BQ9NY72 215 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 IL20RAQ9UHF4 553 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 VDAC3Q9Y277 283 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 CDH10Q9Y6N8 788 aa15.78■□□□□ 0.12
CLDN4-201ENST00000340958 M0R129 80 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 HCN1O60741 890 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 RCBTB2O95199 551 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 CH25HO95992 272 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 TP53P04637 393 aaPredicted RBP15.77■□□□□ 0.11
CLDN4-201ENST00000340958 FUT1P19526 365 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 MST1P26927 711 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 CYB561P49447 251 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 ATP1A1-AS1Q5TC04 95 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF620Q6ZNG0 422 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 ARMC10Q8N2F6 343 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 SLC38A2Q96QD8 506 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 TMEM43Q9BTV4 400 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 MRPS26Q9BYN8 205 aaKnown RBP15.77■□□□□ 0.11
CLDN4-201ENST00000340958 CPNE5Q9HCH3 593 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 OSGIN1Q9UJX0 560 aa15.77■□□□□ 0.11
CLDN4-201ENST00000340958 ARGFXA6NJG6 315 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 PTGES3LE9PB15 166 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 FAM20BO75063 409 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 CCL3P10147 92 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 PEX19P40855 299 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 PTGDSP41222 190 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 RRADP55042 308 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 SNAPC1Q16533 368 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 RPL13AP3Q6NVV1 102 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 OR2T33Q8NG76 320 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 PAQR8Q8TEZ7 354 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 RNF138Q8WVD3 245 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 ST8SIA1Q92185 356 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 ZNF524Q96C55 264 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 PLEKHA8Q96JA3 519 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 SAMD8Q96LT4 415 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 IL4I1Q96RQ9 567 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 OR52D1Q9H346 318 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 CLN6Q9NWW5 311 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 HEATR5AQ86XA9 2040 aa15.76■□□□□ 0.11
CLDN4-201ENST00000340958 TRAV27A0A087WT01 109 aa15.75■□□□□ 0.11
CLDN4-201ENST00000340958 TMED7-TICAM2A0A0A6YYA0 188 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms