RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 DUX4L4P0CJ87 422 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 DUX4L5P0CJ88 424 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 DUX4L6P0CJ89 424 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 DUX4L7P0CJ90 424 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 PPIBP23284 216 aaKnown RBP11.7□□□□□ -0.54
DFFB-202ENST00000339350 GPR3P46089 330 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 STARD6P59095 220 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 SEC61A1P61619 476 aaKnown RBP11.7□□□□□ -0.54
DFFB-202ENST00000339350 HSPB3Q12988 150 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 PEA15Q15121 130 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 MED27Q6P2C8 311 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 ETV3LQ6ZN32 361 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 Q6ZNB5 142 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 CPEB3Q8NE35 698 aaKnown RBP11.7□□□□□ -0.54
DFFB-202ENST00000339350 FAM46DQ8NEK8 389 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 RPLP0P6Q8NHW5 317 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 C16orf78Q8WTQ4 265 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 OVCA2Q8WZ82 227 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 TSSK6Q9BXA6 273 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 PRO1933Q9H354 126 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 DUX4Q9UBX2 424 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 CCL26Q9Y258 94 aa11.7□□□□□ -0.54
DFFB-202ENST00000339350 A0A087X0M5 115 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 A0A1B0GX30 115 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 A0A1W2PRU2 124 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 A6NJY4 79 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 NTN1O95631 604 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 NOS3P29474 1203 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 ANXA11P50995 505 aaKnown RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 CLN3Q13286 438 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 GINS1Q14691 196 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 FAM189A2Q15884 450 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 TRIM40Q6P9F5 258 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 TMEM220Q6QAJ8 160 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 IL20RBQ6UXL0 311 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 GAREM2Q75VX8 874 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 SPRED2Q7Z698 418 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 GPR135Q8IZ08 494 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 HORMAD2Q8N7B1 307 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 OR4D11Q8NGI4 311 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 OR4Q3Q8NH05 313 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 ZNF480Q8WV37 535 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 TLNRD1Q9H1K6 362 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 FN3KQ9H479 309 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 BARX1Q9HBU1 254 aaPredicted RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 MIEF1Q9NQG6 463 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 RPS6KB2Q9UBS0 482 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 STATHP02808 62 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 MT-ND4P03905 459 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 CD3GP09693 182 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 PSRC1Q6PGN9 363 aaPredicted RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 NHLRC1Q6VVB1 395 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 LAS2Q8IYD9 372 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 CFAP206Q8IYR0 622 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 OR5J2Q8NH18 312 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 VWCEQ96DN2 955 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 LRIG1Q96JA1 1093 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 LYSMD1Q96S90 227 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 ACSS1Q9NUB1 689 aaPredicted RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 TEX10Q9NXF1 929 aaPredicted RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 DNAJB11Q9UBS4 358 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 LSM7Q9UK45 103 aaKnown RBP11.69□□□□□ -0.54
DFFB-202ENST00000339350 GPR52Q9Y2T5 361 aa11.69□□□□□ -0.54
DFFB-202ENST00000339350 RFPL4AA6NLU0 287 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 C5orf58C9J3I9 102 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 RFPL4AL1F8VTS6 287 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 OR10H2O60403 315 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 KLHL18O94889 574 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 LATS1O95835 1130 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 CATP04040 527 aaKnown RBP11.68□□□□□ -0.54
DFFB-202ENST00000339350 ZNF14P17017 642 aaPredicted RBP11.68□□□□□ -0.54
DFFB-202ENST00000339350 DDTP30046 118 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 MAPK8P45983 427 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 C1DQ13901 141 aaKnown RBP11.68□□□□□ -0.54
DFFB-202ENST00000339350 ATAT1Q5SQI0 421 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 C1orf185Q5T7R7 199 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 RPL13AP3Q6NVV1 102 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 CASP12Q6UXS9 341 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 SLCO4C1Q6ZQN7 724 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 TMEM25Q86YD3 366 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 SIAH3Q8IW03 269 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 ARMC10Q8N2F6 343 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 ACOT11Q8WXI4 607 aaPredicted RBP11.68□□□□□ -0.54
DFFB-202ENST00000339350 TOLLIPQ9H0E2 274 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 THSD1Q9NS62 852 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 GON4LQ3T8J9 2241 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 NPIPB8E9PQR5 432 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 PRKYO43930 277 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 GALR3O60755 368 aaPredicted RBP11.68□□□□□ -0.54
DFFB-202ENST00000339350 FKTNO75072 461 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 KRT33AO76009 404 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 LIMS1P48059 325 aa11.68□□□□□ -0.54
DFFB-202ENST00000339350 PXNP49023 591 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms