RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PLK3Q9H4B4 646 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 LHX9Q9NQ69 397 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 INPP5EQ9NRR6 644 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ADARB2Q9NS39 739 aaKnown RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DHCR7Q9UBM7 475 aaKnown RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 STRAPQ9Y3F4 350 aaKnown RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 RBM7Q9Y580 266 aaKnown RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 A0A087WZ62 844 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 SERPINE3A8MV23 424 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 NPC1O15118 1278 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FGF19O95750 216 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 PMP2P02689 132 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 F7P08709 466 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ADRA2AP08913 450 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 PRR35P0CG20 571 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CT45A8P0DMV1 189 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CT45A9P0DMV2 189 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 PCSK1P29120 753 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 OR1E1P30953 314 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 IL2RGP31785 369 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ACAA2P42765 397 aaKnown RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CSRP3P50461 194 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ATP5IP56385 69 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CLDN8P56748 225 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 UBE2V2Q15819 145 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 RBBP7Q16576 425 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CT45A2Q5DJT8 189 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 OR2T2Q6IF00 324 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ABHD12BQ7Z5M8 362 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 JAGN1Q8N5M9 183 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 OR4F15Q8NGB8 312 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FCAMRQ8WWV6 532 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 C16orf58Q96GQ5 468 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FSD1LQ9BXM9 530 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 SRMSQ9H3Y6 488 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 KCNJ16Q9NPI9 418 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 POT1Q9NUX5 634 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM100Q9NV29 134 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FBXO34Q9NWN3 711 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 GXYLT2A0PJZ3 443 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 C7orf77A4D0Y5 90 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 E7EQ34 232 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 GOSR2O14653 212 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 GABRDO14764 452 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 SPINT1O43278 529 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 SEMG1P04279 462 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CHRM4P08173 479 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 BMP5P22003 454 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 GPR15P49685 360 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 LUMP51884 338 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 MTPNP58546 118 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FAM189A2Q15884 450 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 RNF151Q2KHN1 245 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 CD200R1LQ6Q8B3 271 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 WDR88Q6ZMY6 472 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ADCK2Q7Z695 626 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF546Q86UE3 836 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 SCN4BQ8IWT1 228 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DCAF4Q8WV16 495 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 WNT8BQ93098 351 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 KIRREL1Q96J84 757 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 PARD6GQ9BYG4 376 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 RAD18Q9NS91 495 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF226Q9NYT6 803 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DOK5Q9P104 306 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 OR51B4Q9Y5P0 310 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 TVP23AA6NH52 213 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DUXAA6NLW8 204 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF705GA8MUZ8 300 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ACOT7O00154 380 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 KCNAB3O43448 404 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 SEMA7AO75326 666 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 C1SP09871 688 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ALPIP09923 528 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 HSD3B1P14060 373 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FABP4P15090 132 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 JAK3P52333 1124 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 IL10RAQ13651 578 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 BSXQ3C1V8 233 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 PLEKHN1Q494U1 663 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ALG10BQ5I7T1 473 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 RPS26P11Q5JNZ5 115 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 PAGE3Q5JUK9 113 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 MFSD14BQ5SR56 506 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DMRTA1Q5VZB9 504 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 USP17L2Q6R6M4 530 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FBXW12Q6X9E4 464 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF705AQ6ZN79 300 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 UBE2R2Q712K3 238 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 LRRC56Q8IYG6 542 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF738Q8NE65 137 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 OR14L1PQ8NHC6 308 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DNAJB3Q8WWF6 145 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 ADGRG7Q96K78 797 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 OR52E6Q96RD3 313 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 FCRL5Q96RD9 977 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 P2RX7Q99572 595 aaKnown RBP3.87□□□□□ -1.79
NEDD4-201ENST00000338963 HSD17B14Q9BPX1 270 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 LRFN3Q9BTN0 628 aa3.87□□□□□ -1.79
NEDD4-201ENST00000338963 DUSP16Q9BY84 665 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms