RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ELOA3BQ3SY89 546 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 PCSK4Q6UW60 755 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 ZNF730Q6ZMV8 503 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 YRDCQ86U90 279 aaKnown RBP19.46■□□□□ 0.71
TPM1-204ENST00000334895 HIPK1Q86Z02 1210 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 GTPBP8Q8N3Z3 284 aaPredicted RBP19.46■□□□□ 0.71
TPM1-204ENST00000334895 CBR4Q8N4T8 237 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 FAM83FQ8NEG4 500 aaPredicted RBP19.46■□□□□ 0.71
TPM1-204ENST00000334895 ELOA3Q8NG57 546 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 OR10G2Q8NGC3 310 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 GIPC3Q8TF64 312 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 TMEM239Q8WW34 195 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 EME1Q96AY2 570 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 OR2B2Q9GZK3 357 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 GABARAPL1Q9H0R8 117 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 COQ10BQ9H8M1 238 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 MEPEQ9NQ76 525 aaPredicted RBP19.46■□□□□ 0.71
TPM1-204ENST00000334895 ZNF71Q9NQZ8 489 aaPredicted RBP19.46■□□□□ 0.71
TPM1-204ENST00000334895 TMCC3Q9ULS5 477 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 TMED7Q9Y3B3 224 aa19.46■□□□□ 0.71
TPM1-204ENST00000334895 TMEM72A0PK05 275 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 FAM47E-STBD1D6RA91 191 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 ERVH48-1M5A8F1 160 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 CCNB2O95067 398 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 CELA3AP09093 270 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 CCNA2P20248 432 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 RBM34P42696 430 aaKnown RBP19.45■□□□□ 0.7
TPM1-204ENST00000334895 MAGEA5P43359 124 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 HTR3AP46098 478 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 PLGLB1Q02325 96 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 EGR4Q05215 589 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 OTUD3Q5T2D3 398 aaPredicted RBP19.45■□□□□ 0.7
TPM1-204ENST00000334895 MBOAT2Q6ZWT7 520 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 PFN4Q8NHR9 129 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 C9orf43Q8TAL5 461 aaPredicted RBP19.45■□□□□ 0.7
TPM1-204ENST00000334895 PSD2Q9BQI7 771 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 B4GALT7Q9UBV7 327 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 TUBD1Q9UJT1 453 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 MRPS18CQ9Y3D5 142 aaKnown RBP19.45■□□□□ 0.7
TPM1-204ENST00000334895 ATRXP46100 2492 aa19.45■□□□□ 0.7
TPM1-204ENST00000334895 EI24O14681 340 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 HPNP05981 417 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 GCKP35557 465 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 APOBEC1P41238 236 aaKnown RBP19.44■□□□□ 0.7
TPM1-204ENST00000334895 EIF1P41567 113 aaKnown RBP19.44■□□□□ 0.7
TPM1-204ENST00000334895 PPP2R2BQ00005 443 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 TOMM20Q15388 145 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 PGBD2Q6P3X8 592 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 ZER1Q7Z7L7 766 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 MEX3DQ86XN8 651 aaKnown RBP19.44■□□□□ 0.7
TPM1-204ENST00000334895 NRMQ8IXM6 262 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 C9orf16Q9BUW7 83 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 SMURF2Q9HAU4 748 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 C20orf141Q9NUB4 165 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 B3GNT3Q9Y2A9 372 aa19.44■□□□□ 0.7
TPM1-204ENST00000334895 ZC3H12DA2A288 527 aaKnown RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 OR2M5A3KFT3 312 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ARRDC5A6NEK1 342 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 KPNA4O00629 521 aaPredicted RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 SUSD5O60279 629 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 OR10H3O60404 316 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 TRAPPC6AO75865 159 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 RASAL1O95294 804 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ZNF26P17031 533 aaPredicted RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 CBLP22681 906 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 CXCR1P25024 350 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ADH6P28332 368 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ARHGDIAP52565 204 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 PPIAP62937 165 aaKnown RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 PLEKHN1Q494U1 663 aaPredicted RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 GLYR1Q49A26 553 aaPredicted RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 RAET1LQ5VY80 246 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 SLC6A19Q695T7 634 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 FAHD1Q6P587 224 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ZBTB49Q6ZSB9 765 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 PRICKLE2Q7Z3G6 844 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 DTNBP1Q96EV8 351 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 HS6ST2Q96MM7 605 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 FEVQ99581 238 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 GPA33Q99795 319 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 TMEM43Q9BTV4 400 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 RASSF4Q9H2L5 321 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ADNPQ9H2P0 1102 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 CHRNA9Q9UGM1 479 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 IGSF10Q6WRI0 2623 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 BSNQ9UPA5 3926 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 GASTP01350 101 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 ZNF17P17021 662 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 OMPP47874 163 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 DAPP51397 102 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 LY6DQ14210 128 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 NADK2Q4G0N4 442 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 WIPI1Q5MNZ9 446 aaPredicted RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 PPP4R4Q6NUP7 873 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 TTC33Q6PID6 262 aaPredicted RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 SLC22A16Q86VW1 577 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 RNF113BQ8IZP6 322 aaKnown RBP19.43■□□□□ 0.7
TPM1-204ENST00000334895 EXD3Q8N9H8 876 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 AQP11Q8NBQ7 271 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 OR14L1PQ8NHC6 308 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms