RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CDC42P60953 191 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 EFR3AQ14156 821 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 C6orf141Q5SZD1 244 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF730Q6ZMV8 503 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 MBOAT2Q6ZWT7 520 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 CDK20Q8IZL9 346 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 TMEM156Q8N614 296 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 OR4N2Q8NGD1 307 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 OR9Q2Q8NGE9 314 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 TRUB1Q8WWH5 349 aaKnown RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 NIPSNAP1Q9BPW8 284 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 SLX1AQ9BQ83 275 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 WFDC6Q9BQY6 131 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 TSPAN10Q9H1Z9 355 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 RLIMQ9NVW2 624 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 SELENONQ9NZV5 590 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 TMEM5Q9Y2B1 443 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 DIDO1Q9BTC0 2240 aaKnown RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 PINLYPA6NC86 204 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 CPSF4LA6NMK7 179 aaKnown RBP14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 G3V3Y1 287 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 NME2P1O60361 137 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 TPST2O60704 377 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 CSTAP01040 98 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 RNF224P0DH78 156 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 NME2P22392 152 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC6A8P48029 635 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 GPR85P60893 370 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 TSPAN31Q12999 210 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 APOFQ13790 326 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 SEC23BQ15437 767 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 OR1Q1Q15612 314 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 GDF7Q7Z4P5 450 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 MISPQ8IVT2 679 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 SULF2Q8IWU5 870 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 CYP4Z2PQ8N1L4 340 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC43A2Q8N370 569 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC15A4Q8N697 577 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 DNAJA4Q8WW22 397 aaPredicted RBP14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 TEX12Q9BXU0 123 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 PRRG3Q9BZD7 231 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 DNAJB12Q9NXW2 375 aaKnown RBP14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 SCN3BQ9NY72 215 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 TPRKBQ9Y3C4 175 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 PCDHGB6Q9Y5F9 930 aa14.96□□□□□ -0.01
PDLIM1-201ENST00000329399 A0A087WUU8 490 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CLEC18AA5D8T8 446 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 OR6C70A6NIJ9 312 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ZAR1LA6NP61 321 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CHP2O43745 196 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 EIF4E2O60573 245 aaKnown RBP14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 TSPAN2O60636 221 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CD46P15529 392 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 FPR3P25089 353 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 RFX3P48380 749 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 COPZ1P61923 177 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 IL5RAQ01344 420 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CD47Q08722 323 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CDK5R2Q13319 367 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ANKRD34AQ69YU3 496 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ULK3Q6PHR2 472 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 KLHL17Q6TDP4 642 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 FAM180AQ6UWF9 173 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CLEC18BQ6UXF7 455 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ATCAYQ86WG3 371 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CLDN22Q8N7P3 220 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CLEC18CQ8NCF0 446 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 FAM71CQ8NEG0 241 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ASB15Q8WXK1 588 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 FRMD6Q96NE9 622 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 GAL3ST4Q96RP7 486 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 VCX3AQ9NNX9 186 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CCNB1IP1Q9NPC3 277 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 PCNX1Q96RV3 2341 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ANKUB1A6NFN9 424 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 REM1O75628 298 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 UTS2O95399 124 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 CLIC3O95833 236 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 IGF2P01344 180 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 TTKP33981 857 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 GSSP48637 474 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 TMED10P49755 219 aaKnown RBP14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 PLCXD2Q0VAA5 305 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ZNF791Q3KP31 576 aaPredicted RBP14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 DESI1Q6ICB0 168 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 RPL13AP3Q6NVV1 102 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 RASSF6Q6ZTQ3 369 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ZER1Q7Z7L7 766 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 ZAR1Q86SH2 424 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 OR4C3Q8NH37 302 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 PRR7Q8TB68 274 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 IPCEF1Q8WWN9 437 aaPredicted RBP14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 GTPBP3Q969Y2 492 aaKnown RBP14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 C5orf34Q96MH7 638 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 C12orf10Q9HB07 376 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 PLCXD1Q9NUJ7 323 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 IMPAD1Q9NX62 359 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 RPS6KB2Q9UBS0 482 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 REV1Q9UBZ9 1251 aa14.95□□□□□ -0.02
PDLIM1-201ENST00000329399 PCDHGB5Q9Y5G0 923 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms