RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 LAMP1P11279 417 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 UQCRBP14927 111 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 FPR2P25090 351 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 ARL1P40616 181 aaPredicted RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 CD69Q07108 199 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 EPS8Q12929 822 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 SELPLGQ14242 412 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 RGNQ15493 299 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 NDUFA9Q16795 377 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF385BQ569K4 471 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 CCNYL2Q5T2Q4 361 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 OR4F3Q6IEY1 312 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 ZCCHC12Q6PEW1 402 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 PLXDC2Q6UX71 529 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 EIF3MQ7L2H7 374 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF675Q8TD23 568 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 TSSK3Q96PN8 268 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 C9orf16Q9BUW7 83 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 BTBD2Q9BX70 525 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 BCL2L10Q9HD36 194 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 ZFP64Q9NPA5 681 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 TSR3Q9UJK0 312 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 A0A087WV62 115 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 KRT87PA6NCN2 255 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 WASHC1A8K0Z3 465 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 H0YAE9 185 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 H7BY64 318 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 RGS9O75916 674 aaPredicted RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 MDKP21741 143 aaPredicted RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 FASP25445 335 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 MAPK12P53778 367 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 RHAGQ02094 409 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 MINDY4Q4G0A6 757 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 FAM98BQ52LJ0 330 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 SGO1Q5FBB7 561 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 FAM219BQ5XKK7 198 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 SLC48A1Q6P1K1 146 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 TRIM40Q6P9F5 258 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 RBMS3Q6XE24 437 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 OR7A2PQ8NGA2 310 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 OR4F5Q8NH21 305 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 UTP15Q8TED0 518 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 PYDC1Q8WXC3 89 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 STARD4Q96DR4 205 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 EGLN2Q96KS0 407 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF681Q96N22 645 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 PRAP1Q96NZ9 151 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 PANX1Q96RD7 426 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 INPP5KQ9BT40 448 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 DPH7Q9BTV6 452 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 OSBPL11Q9BXB4 747 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 YTHDF1Q9BYJ9 559 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 POLR2J2Q9GZM3 115 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 POLR2J3Q9H1A7 115 aaKnown RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 IKZF5Q9H5V7 419 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 TPT1P8Q9HAU6 139 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 SLC6A13Q9NSD5 602 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 SIRT3Q9NTG7 399 aaPredicted RBP5.89□□□□□ -1.47
CSTF3-201ENST00000323959 CLCF1Q9UBD9 225 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 DNAJB9Q9UBS3 223 aa5.89□□□□□ -1.47
CSTF3-201ENST00000323959 B4DSR2 109 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 UPK1AO00322 258 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ACOX3O15254 700 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PDPK1O15530 556 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 OR1F1O43749 312 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 AGR2O95994 175 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ACTL6AO96019 429 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TGFB1P01137 390 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 IL3P08700 152 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 FAM58BPP0C7Q3 252 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 APEX1P27695 318 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 CDKN2CP42773 168 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ANXA11P50995 505 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 SKP1P63208 163 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PSPHP78330 225 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 MRPS22P82650 360 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TNFRSF17Q02223 184 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 C2orf80Q0P641 193 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 MFSD4BQ5TF39 518 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 OLFML2AQ68BL7 652 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF793Q6ZN11 406 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF551Q7Z340 670 aaPredicted RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 WFDC8Q8IUA0 241 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF740Q8NDX6 193 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 NFAM1Q8NET5 270 aaPredicted RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 RASSF5Q8WWW0 418 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 SLC35B4Q969S0 331 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 INTS12Q96CB8 462 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 FAM120BQ96EK7 910 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PYURFQ96I23 114 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TRIM2Q9C040 744 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PCDHAC1Q9H158 963 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 OR51B5Q9H339 312 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 Q9H521 79 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 FAM8A1Q9UBU6 413 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TESQ9UGI8 421 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PLAGL1Q9UM63 463 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 FREM3P0C091 2139 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 A0A1W2PRB8 838 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TRIM64CA6NLI5 447 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms