RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RTP4Q96DX8 246 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 DMRT3Q9NQL9 472 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 DZANK1Q9NVP4 752 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 PTGER4P35408 488 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 GPR150Q8NGU9 434 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 SCAMP4Q969E2 229 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 FBXL4Q9UKA2 621 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 GPR39O43194 453 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 LILRB3O75022 631 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 GCH1P30793 250 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 C15orf54Q8N8G6 183 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 SORT1Q99523 831 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 FAM171A2A8MVW0 826 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 DFFBO76075 338 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 OGFOD3Q6PK18 319 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 ADGRG5Q8IZF4 528 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 OR56B1Q8NGI3 324 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 UBL7Q96S82 380 aaPredicted RBP15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC29A1Q99808 456 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 IL26Q9NPH9 171 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 CLDND1Q9NY35 253 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 HOXB5P09067 269 aa15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 PURGQ9UJV8 347 aaKnown RBP15.83■□□□□ 0.12
SMCHD1-201ENST00000320876 IGLON5A6NGN9 336 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SEC14L5O43304 696 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 ZNF551Q7Z340 670 aaPredicted RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 ARHGAP33O14559 1287 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 FOLR1P15328 257 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SQSTM1Q13501 440 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 LRRC56Q8IYG6 542 aaPredicted RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 RCE1Q9Y256 329 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 RTCAO00442 366 aaKnown RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 OLFM2O95897 454 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 METTL15P1P0C7V9 234 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 OR6V1Q8N148 313 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 ANKRD19PQ9H560 264 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 KLHL42Q9P2K6 505 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 ICMTO60725 284 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 PRDX3P30048 256 aaKnown RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 ESPL1Q14674 2120 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 WBP2NLQ6ICG8 309 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 BPIFB2Q8N4F0 458 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 C20orf85Q9H1P6 137 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 KCNIP2Q9NS61 270 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 ADAM12O43184 909 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 CD79AP11912 226 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC10A2Q12908 348 aaPredicted RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SAP130Q9H0E3 1048 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 DDX31Q9H8H2 851 aaKnown RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 FAM227AF5H4B4 570 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 H0Y8G0 127 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 PRICKLE3O43900 615 aaPredicted RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 LAX1Q8IWV1 398 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 PSMF1Q92530 271 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 TXLNGYQ9BZA5 131 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SPHK2Q9NRA0 654 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 UFSP2Q9NUQ7 469 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 MED17Q9NVC6 651 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SNED1Q8TER0 1413 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 OR2T1O43869 369 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 NSA2O95478 260 aaKnown RBP15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 GATMP50440 423 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 DPPA2Q7Z7J5 298 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 OR52H1Q8NGJ2 320 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC23A2Q9UGH3 650 aa15.82■□□□□ 0.12
SMCHD1-201ENST00000320876 A0A1W2PP55 124 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 LIPCP11150 499 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 ZMAT1Q5H9K5 638 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 C1orf87Q8N0U7 546 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 LIN7BQ9HAP6 207 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 PIKFYVEQ9Y2I7 2098 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 C2orf78A6NCI8 922 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 F6UZH7 168 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 H3BML4 177 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 PLSCR1O15162 318 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 FGF18O76093 207 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SCG5P05408 212 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SFTPDP35247 375 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 PATZ1Q9HBE1 687 aaKnown RBP15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 C21orf33P30042 268 aaPredicted RBP15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 TGM4P49221 684 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 NRARPQ7Z6K4 114 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SDR9C7Q8NEX9 313 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 KATNB1Q9BVA0 655 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SLC6A17Q9H1V8 727 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 WIF1Q9Y5W5 379 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SCN9AQ15858 1988 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 PLSCR5A0PG75 271 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 PRAMEF27A3QJZ7 478 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 LAP3P28838 519 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 TAGLN2P37802 199 aaKnown RBP15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.128e-7■■■■■ 29
SMCHD1-201ENST00000320876 PAGE3Q5JUK9 113 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 PRAMEF9Q5VWM5 478 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 RBPMSQ93062 196 aaKnown RBP15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 C1GALT1Q9NS00 363 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 BABAM2Q9NXR7 383 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 SNRNP200O75643 2136 aaKnown RBP15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 TRAPPC2LH3BP13 241 aa15.81■□□□□ 0.12
SMCHD1-201ENST00000320876 RAD1O60671 282 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms