RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF770Q6IQ21 691 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 C5orf46Q6UWT4 87 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF730Q6ZMV8 503 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 RRM2BQ7LG56 351 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 FAM109AQ8N4B1 249 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 FAM83FQ8NEG4 500 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 OR4K5Q8NGD3 323 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 OR14L1PQ8NHC6 308 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM255BQ8WV15 326 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 EME1Q96AY2 570 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 NPAS1Q99742 590 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 CIB1Q99828 191 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 PIGQQ9BRB3 760 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ACKR4Q9NPB9 350 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 SERINC1Q9NRX5 453 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 PDP1Q9P0J1 537 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 CHRNA9Q9UGM1 479 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 MED31Q9Y3C7 131 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 SPIN1Q9Y657 262 aaPredicted RBP12.31□□□□□ -0.44
PRPF18-201ENST00000320054 DNAJC13O75165 2243 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
PRPF18-201ENST00000320054 OR2M5A3KFT3 312 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 FAM166BA8MTA8 275 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 A8MVM7 634 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 TRAPPC6AO75865 159 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 WISP1O95388 367 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 SFTPCP11686 197 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 PEX2P28328 305 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 IFNGR2P38484 337 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 RFC3P40938 356 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 CLK1P49759 484 aaKnown RBP12.3□□□□□ -0.44
PRPF18-201ENST00000320054 UGT2B15P54855 530 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 CTBP2P56545 445 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 PRKCDQ05655 676 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 SELENBP1Q13228 472 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 TOMM20Q15388 145 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 SNCBQ16143 134 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 PLEKHN1Q494U1 663 aaPredicted RBP12.3□□□□□ -0.44
PRPF18-201ENST00000320054 LPCAT4Q643R3 524 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 SLC6A19Q695T7 634 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 FAHD1Q6P587 224 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 TBPL2Q6SJ96 375 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 PACRGLQ8N7B6 248 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 OR10G2Q8NGC3 310 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 SLC25A43Q8WUT9 341 aaPredicted RBP12.3□□□□□ -0.44
PRPF18-201ENST00000320054 PNPLA2Q96AD5 504 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 BARD1Q99728 777 aaKnown RBP12.3□□□□□ -0.44
PRPF18-201ENST00000320054 ZDHHC11Q9H8X9 412 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 KRCC1Q9NPI7 259 aaPredicted RBP12.3□□□□□ -0.44
PRPF18-201ENST00000320054 LHX6Q9UPM6 363 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 MGAT4BQ9UQ53 548 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM5Q9Y2B1 443 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 MED12Q93074 2177 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 ATMQ13315 3056 aa12.3□□□□□ -0.44
PRPF18-201ENST00000320054 PRRC2CQ9Y520 2896 aaKnown RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 IGKV1D-42A0A075B6H8 117 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 SHISA8B8ZZ34 492 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 EFNA2O43921 213 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 SUSD5O60279 629 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 OR10H3O60404 316 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 NPIPB7O75200 414 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 ANXA8P13928 327 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 CBLP22681 906 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 CHMP24386 653 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 MAGEA5P43359 124 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 PTDSS1P48651 473 aaKnown RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 FOXK1P85037 733 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 PPP2R2BQ00005 443 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 DAG1Q14118 895 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 SLC10A1Q14973 349 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 LAPTM4AQ15012 233 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 RNFT1Q5M7Z0 435 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 RAET1LQ5VY80 246 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 PPP4R4Q6NUP7 873 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 C3orf33Q6P1S2 294 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 C1orf94Q6P1W5 598 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 PGBD2Q6P3X8 592 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 ZBTB49Q6ZSB9 765 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 NRMQ8IXM6 262 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 CDK20Q8IZL9 346 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 HS3ST5Q8IZT8 346 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 CBR4Q8N4T8 237 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 OR6S1Q8NH40 331 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 NRG4Q8WWG1 115 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 DNAJC9Q8WXX5 260 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 FEVQ99581 238 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 RBM4BQ9BQ04 359 aaKnown RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 RBM4Q9BWF3 364 aaKnown RBP12.29□□□□□ -0.44
PRPF18-201ENST00000320054 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 MFRPQ9BY79 579 aa12.29□□□□□ -0.44
PRPF18-201ENST00000320054 POTEKPQ9BYX7 375 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms