RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ACOT11Q8WXI4 607 aaPredicted RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 TINAGL1Q9GZM7 467 aaPredicted RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 MS4A7Q9GZW8 240 aaPredicted RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 MED28Q9H204 178 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 LMAN1LQ9HAT1 526 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 HINT3Q9NQE9 182 aaKnown RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 CNOT2Q9NZN8 540 aaKnown RBP9.34□□□□□ -0.91
FOXN4-201ENST00000299162 NPAP1Q9NZP6 1156 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 ACAD8Q9UKU7 415 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 ZNF175Q9Y473 711 aa9.34□□□□□ -0.91
FOXN4-201ENST00000299162 A0A0J9YY10 115 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 A6NCN8 305 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PRR19A6NJB7 356 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PRAMEF26H0Y7S4 382 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PLA2G10O15496 165 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 YKT6O15498 198 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SCG5P05408 212 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PEPDP12955 493 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 OMPP47874 163 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SNRPGP62308 76 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 BNC1Q01954 994 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 FCN2Q15485 313 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 CNIH2Q6PI25 160 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 RANBP3LQ86VV4 465 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 TMEM163Q8TC26 289 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ZNF559Q9BR84 538 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 OR52D1Q9H346 318 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SAV1Q9H4B6 383 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 CCDC86Q9H6F5 360 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ISG20L2Q9H9L3 353 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 CALML5Q9NZT1 146 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PILRAQ9UKJ1 303 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ERVK-19Q9WJR5 959 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 NCOR1O75376 2440 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 GRPRP30550 384 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 RPL35P42766 123 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 EMDP50402 254 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 MRPS21P82921 87 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 TSPAN31Q12999 210 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 FAM53BQ14153 422 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 GARNL3Q5VVW2 1013 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 MCATQ8IVS2 390 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ARL14Q8N4G2 192 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 NANOGP1Q8N7R0 232 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 UPRTQ96BW1 309 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 GAL3ST4Q96RP7 486 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 LRRC61Q9BV99 259 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 POLDIP3Q9BY77 421 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 BCL2L14Q9BZR8 327 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 KLHL1Q9NR64 748 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PNO1Q9NRX1 252 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 RAB19A4D1S5 217 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 C17orf51A8MQB3 221 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SIGLEC5O15389 551 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 GALR3O60755 368 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ADAM11O75078 769 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 PROS1P07225 676 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ARSBP15848 533 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 RABIFP47224 123 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 CSNK1EP49674 416 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 RAB14P61106 215 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SIGLEC14Q08ET2 396 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 FAM27D1Q5T7N8 215 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 MZT2BQ6NZ67 158 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 RPTNQ6XPR3 784 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 TMEM184AQ6ZMB5 413 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 CA13Q8N1Q1 262 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 LRRC17Q8N6Y2 441 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 OR52H1Q8NGJ2 320 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SPRYD4Q8WW59 207 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 NRSN2Q9GZP1 204 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 CLEC4MQ9H2X3 399 aaPredicted RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 FN3KQ9H479 309 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 TXNL4BQ9NX01 149 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 DHCR7Q9UBM7 475 aaKnown RBP9.33□□□□□ -0.92
FOXN4-201ENST00000299162 TNFRSF10DQ9UBN6 386 aa9.33□□□□□ -0.92
FOXN4-201ENST00000299162 SPTY2D1-AS1A0A0U1RR47 76 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 PRODHO43272 600 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 LYRM1O43325 122 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 PTP4A3O75365 173 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 RFPL3O75679 317 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 PPM1BO75688 479 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 PPP1R3DO95685 299 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 GSTM3P21266 225 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 TEAD1P28347 426 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 CRYBB2P43320 205 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 CDK5Q00535 292 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 SLC3A1Q07837 685 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 CRYZQ08257 329 aaKnown RBP9.32□□□□□ -0.92
FOXN4-201ENST00000299162 CCINQ13939 588 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 GALEQ14376 348 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 SGCAQ16586 387 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 ARL9Q6T311 187 aa9.32□□□□□ -0.92
FOXN4-201ENST00000299162 CCDC36Q8IYA8 594 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms