RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 ZMYND19Q96E35 227 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 OMA1Q96E52 524 aa12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 FRMD6Q96NE9 622 aa12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 DCLRE1CQ96SD1 692 aaKnown RBP12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 BTBD2Q9BX70 525 aa12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 CTSFQ9UBX1 484 aa12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 STUB1Q9UNE7 303 aa12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
TNFRSF8-201ENST00000263932 PRRC2CQ9Y520 2896 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ELOA3DA6NLF2 546 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 LAMTOR5O43504 91 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SSTR2P30874 369 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ELOAQ14241 798 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 DECR1Q16698 335 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ARHGAP11BQ3KRB8 267 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ELOA3BQ3SY89 546 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 BCL2L15Q5TBC7 163 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 AGAP6Q5VW22 663 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SLC25A45Q8N413 288 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SLC37A3Q8NCC5 494 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ELOA3Q8NG57 546 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 PPP1R14BQ96C90 147 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 AGAP4Q96P64 663 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 OR6C1Q96RD1 312 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SSNA1O43805 119 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 CTNSO60931 367 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 PLGP00747 810 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 NID1P14543 1247 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 MAKP20794 623 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 HTR2AP28223 471 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SHC1P29353 583 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 HMGA2P52926 109 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 NXPH1P58417 271 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 TP53I3Q53FA7 332 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 LCN1P1Q5VSP4 162 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 PRPF38BQ5VTL8 546 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SFRP4Q6FHJ7 346 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 TMCO6Q96DC7 493 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 ZNF582Q96NG8 517 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 GAREM1Q9H706 876 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 BRD7Q9NPI1 651 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 FLRT3Q9NZU0 649 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SEC14L4Q9UDX3 406 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 CBLCQ9ULV8 474 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 TRIM64A6NGJ6 449 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SCDO00767 359 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 FBXO45P0C2W1 286 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 PTHLHP12272 177 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 OR10A3P58181 314 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 HSD11B2P80365 405 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 PSG6Q00889 435 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 CXXC5Q7LFL8 322 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 OR1L3Q8NH93 324 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 NXF5Q9H1B4 397 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 FBXO8Q9NRD0 319 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 SIDT1Q9NXL6 827 aaKnown RBP12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 B3GNT3Q9Y2A9 372 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 CHST2Q9Y4C5 530 aa12.41□□□□□ -0.42
TNFRSF8-201ENST00000263932 LALBAP00709 142 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 HLA-DQA2P01906 255 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 PRKAR1BP31321 381 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 FABP5Q01469 135 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 SLX4IPQ5VYV7 408 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 ZNF770Q6IQ21 691 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 TM9SF4Q92544 642 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 DIO2Q92813 273 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 OSTF1Q92882 214 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 ELF4Q99607 663 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 SLC22A4Q9H015 551 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 ZNF304Q9HCX3 659 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 COPS7AQ9UBW8 275 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 RIIAD1A6NNX1 92 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 PRAMEF2O60811 474 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 IGKV1D-16P01601 117 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 SQSTM1Q13501 440 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 KRR1Q13601 381 aaKnown RBP12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 METAP1DQ6UB28 335 aaPredicted RBP12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 PRSS45Q7RTY3 260 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 LINC00471Q8N535 108 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 OR4Q3Q8NH05 313 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 SLC25A18Q9H1K4 315 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 ADAM18Q9Y3Q7 739 aa12.4□□□□□ -0.42
TNFRSF8-201ENST00000263932 IGHV1OR21-1A0A087WYE8 117 aa12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 PRR23D1E9PI22 279 aaPredicted RBP12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 H7C1C5 153 aa12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 F13BP05160 661 aa12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 PRR23D2P0DMB1 279 aaPredicted RBP12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 HTR2BP41595 481 aa12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 ATP12AP54707 1039 aa12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 LCN6P62502 163 aa12.4□□□□□ -0.43
TNFRSF8-201ENST00000263932 TATDN3Q17R31 274 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms