RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 GHDCQ8N2G8 530 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 SLC25A45Q8N413 288 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 ZNF615Q8N8J6 731 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 ADGRL4Q9HBW9 690 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 HPGDSO60760 199 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 CSTAP01040 98 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 ATP12AP54707 1039 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 PRAMEF17Q5VTA0 474 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 RPTNQ6XPR3 784 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 FAM181AQ8N9Y4 354 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 SDR9C7Q8NEX9 313 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 OR51L1Q8NGJ5 315 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 OR5M3Q8NGP4 307 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 TXNDC15Q96J42 360 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 ZNF285Q96NJ3 590 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 RNF32Q9H0A6 362 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 ZMIZ1Q9ULJ6 1067 aa17.17■□□□□ 0.34
PDLIM4-201ENST00000253754 LILRA5A6NI73 299 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 SLC22A31A6NKX4 558 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 GTPBP1O00178 669 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ZNF3P17036 446 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 CD1CP29017 333 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 RBM34P42696 430 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 HCCSP53701 268 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 SKP1P63208 163 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 E2F1Q01094 437 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 FUT7Q11130 342 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 KRR1Q13601 381 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 GALEQ14376 348 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ARMC4Q5T2S8 1044 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ULK3Q6PHR2 472 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 LINC00114Q6XXX2 140 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 SSX6Q7RTT6 188 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 NR2C2APQ86WQ0 139 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ZSCAN1Q8NBB4 408 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 IL17RDQ8NFM7 739 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 OR4K13Q8NH42 304 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 AP3S1Q92572 193 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 TMCO6Q96DC7 493 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 RNF31Q96EP0 1072 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ERMAPQ96PL5 475 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ATF6BQ99941 703 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 YIPF2Q9BWQ6 316 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 PPIL3Q9H2H8 161 aaKnown RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ERVMER34-1Q9H9K5 563 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 UCK1Q9HA47 277 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 RPS6KB2Q9UBS0 482 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 SERINC4A6NH21 518 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 RHPN2P1A8MT19 583 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 A8MUA0 341 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 IMPA2O14732 288 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ZNF749O43361 778 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 TMCC2O75069 709 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 CSF3P09919 207 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 SBK2P0C263 348 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 PEPDP12955 493 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 OR1D4P47884 311 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 COPZ1P61923 177 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 DAB2P98082 770 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 FAM27D1Q5T7N8 215 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ARL9Q6T311 187 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 RTL4Q6ZR62 310 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 OR52E2Q8NGJ4 325 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 SENP5Q96HI0 755 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ELF4Q99607 663 aaPredicted RBP17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 G6PC3Q9BUM1 346 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 PDE7BQ9NP56 450 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ASB6Q9NWX5 421 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 ADAM18Q9Y3Q7 739 aa17.16■□□□□ 0.34
PDLIM4-201ENST00000253754 C17orf105B2RV13 164 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 MCIDASD6RGH6 385 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 MAGEB4O15481 346 aaPredicted RBP17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 HIST1H1CP16403 213 aaKnown RBP17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 SLC6A6P31641 620 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 ZNF85Q03923 595 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 PYDC2Q56P42 97 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 ZNF550Q7Z398 422 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 AKAP14Q86UN6 197 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 SMPDL3BQ92485 455 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 C4orf36Q96KX1 117 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 RP1P56715 2156 aa17.15■□□□□ 0.34
PDLIM4-201ENST00000253754 TLCD2A6NGC4 264 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 J3QLW9 94 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 POLR1CO15160 346 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 OIP5O43482 229 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 ZNF19P17023 458 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 HK1P19367 917 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 CASP3P42574 277 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 ARRB1P49407 418 aaPredicted RBP17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 HSD17B7P56937 341 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 OR12D2P58182 307 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 XKRXQ6PP77 449 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 TTLL10Q6ZVT0 673 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 UBE2J2Q8N2K1 259 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 C17orf47Q8NEP4 570 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 OR5W2Q8NH69 310 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 PIGKQ92643 395 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 FSCN3Q9NQT6 498 aa17.14■□□□□ 0.33
PDLIM4-201ENST00000253754 PNO1Q9NRX1 252 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms