RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SLC1A3P43003 542 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 DIO3P55073 304 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 RPS18P62269 152 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 RAP1AP62834 184 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 RPP30P78346 268 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 NHSL2Q5HYW2 709 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TCTE1Q5JU00 501 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 BRAT1Q6PJG6 821 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 RNF141Q8WVD5 230 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 FEVQ99581 238 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 PLEKHJ1Q9NW61 149 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 DERAQ9Y315 318 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SLC22A31A6NKX4 558 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 CYB5BO43169 146 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 CD63P08962 238 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 P2RX3P56373 397 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 PLAURQ03405 335 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 LRRTM1Q86UE6 522 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SIAH1Q8IUQ4 282 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TMEM104Q8NE00 496 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 DMBX1Q8NFW5 382 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 OR5M1Q8NGP8 315 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 DUSP19Q8WTR2 217 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 RAB3CQ96E17 227 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 FAM46AQ96IP4 442 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 TIMM29Q9BSF4 260 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 RNH1P13489 461 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 RPA2P15927 270 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 LAP3P28838 519 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TNFSF8P32971 234 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ZNF805Q5CZA5 627 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SULF2Q8IWU5 870 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 INTS12Q96CB8 462 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 ARSGQ96EG1 525 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SLC41A2Q96JW4 573 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 MACROD1Q9BQ69 325 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TMEM59Q9BXS4 323 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ZNF587BE7ETH6 402 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 PPP5D1E7EU14 171 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SOCS6O14544 535 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 MSTNO14793 375 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SURF4O15260 269 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SERPINA5P05154 406 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 CRYZQ08257 329 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 KCNJ11Q14654 390 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 COL13A1Q5TAT6 717 aaPredicted RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 OVCH1Q7RTY7 1134 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 OR7G3Q8NG95 312 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ZNF251Q9BRH9 671 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 NT5DC2Q9H857 520 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ZFP92A6NM28 416 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ADRB1P08588 477 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SGSHP51688 502 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TLE4Q04727 773 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 EMX2Q04743 252 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SCAPQ12770 1279 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 RPL13AP3Q6NVV1 102 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TMEM173Q86WV6 379 aaPredicted RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 MS4A15Q8N5U1 240 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 OR2T11Q8NH01 316 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TRMT61AQ96FX7 289 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SLC39A9Q9NUM3 307 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ASB3Q9Y575 518 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 FAM90A27PA6NNH2 459 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TMEM127O75204 238 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TAF9Q16594 264 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 ZNF239Q16600 458 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 DCAF12L1Q5VU92 463 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 SLC5A8Q8N695 610 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 BPIFCQ8NFQ6 507 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 C2orf15Q8WU43 125 aaKnown RBP10.43□□□□□ -0.74
MSH6-201ENST00000234420 MAL2Q969L2 176 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 TVP23CQ96ET8 276 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 MKS1Q9NXB0 559 aa10.43□□□□□ -0.74
MSH6-201ENST00000234420 LDB3O75112 727 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 GMPRP36959 345 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 CDK5R2Q13319 367 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 EDDM3AQ14507 147 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 P2RY14Q15391 338 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 C22orf39Q6P5X5 142 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 VWA1Q6PCB0 445 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 TMIGD1Q6UXZ0 262 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 TSPYL5Q86VY4 417 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 MEX3DQ86XN8 651 aaKnown RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 OR51L1Q8NGJ5 315 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 OR5L2Q8NGL0 311 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 RASD2Q96D21 266 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 BTF3L4Q96K17 158 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 DHRS9Q9BPW9 319 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 CEBPZOSA8MTT3 80 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 TTRP02766 147 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 CNR1P21554 472 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 IMPA1P29218 277 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 KRTDAPP60985 99 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 SPCS2Q15005 226 aa10.42□□□□□ -0.74
MSH6-201ENST00000234420 ZNF468Q5VIY5 522 aaPredicted RBP10.42□□□□□ -0.74
MSH6-201ENST00000234420 TEX26Q8N6G2 289 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms