RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 METTL11BQ5VVY1 283 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 RNLSQ5VYX0 342 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 OR14A16Q8NHC5 309 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 PHOSPHO1Q8TCT1 267 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 THAP4Q8WY91 577 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 TRIM36Q9NQ86 728 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 ING1Q9UK53 422 aaPredicted RBP13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 ACAD8Q9UKU7 415 aa13.13□□□□□ -0.31
PCDHB3-201ENST00000231130 UBE2QL1A1L167 161 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 KDM4EB2RXH2 506 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 EIF1BO60739 113 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 CLTBP09497 229 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SAGP10523 405 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 TYRP14679 529 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 FPR3P25089 353 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 NTSP30990 170 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 MC3RP41968 323 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 DUSP2Q05923 314 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 AGERQ15109 404 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 MANEAQ5SRI9 462 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 LDLRAD3Q86YD5 345 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ARL14Q8N4G2 192 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ZSCAN1Q8NBB4 408 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 AMDHD1Q96NU7 426 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SGPP1Q9BX95 441 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 NOX3Q9HBY0 568 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ASF1BQ9NVP2 202 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 HCFC1R1Q9NWW0 138 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SLC7A7Q9UM01 511 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 NPIPA5A0A0B4J1W7 369 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF705EA8MWA4 302 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 NPIPA7E9PJI5 369 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 G3V3Q6 166 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 NDUFS4O43181 175 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 NPIPA8P0DM63 369 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 PSMB1P20618 241 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 RFC3P40938 356 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 RAP2BP61225 183 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 FUT5Q11128 374 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 IRF5Q13568 498 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 APOOLQ6UXV4 268 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SVBPQ8N300 66 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 POGLUT1Q8NBL1 392 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF485Q8NCK3 441 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 OR5M1Q8NGP8 315 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ABHD4Q8TB40 342 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 OSTF1Q92882 214 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF471Q9BX82 626 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ICKQ9UPZ9 632 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 PLXNB3Q9ULL4 1909 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 HEATR5BQ9P2D3 2071 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ANKRD61A6NGH8 418 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ERI3O43414 337 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 CDC123O75794 336 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 ZNF35P13682 527 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 RAB5BP61020 215 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 EFNB1P98172 346 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SORDQ00796 357 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 TMEM215Q68D42 235 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 OR5M9Q8NGP3 310 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 GHSRQ92847 366 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 PAPOLGQ9BWT3 736 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SLC46A2Q9BY10 475 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 CPEB1Q9BZB8 566 aaKnown RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 C6orf106Q9H6K1 298 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 TMEM231Q9H6L2 316 aa13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 GPN1Q9HCN4 374 aaPredicted RBP13.12□□□□□ -0.31
PCDHB3-201ENST00000231130 PQLC2LA1A4F0 135 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 SULT1C2O00338 296 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 SELPP16109 830 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 BMP7P18075 431 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 S100PP25815 95 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 SLC22A10Q63ZE4 541 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 IL17RCQ8NAC3 791 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 OR9A2Q8NGT5 310 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 MNTQ99583 582 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 UBQLN3Q9H347 655 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 ANKRD19PQ9H560 264 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 KLHL28Q9NXS3 571 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 ATXN7L1Q9ULK2 861 aaPredicted RBP13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 IFNA4P05014 189 aa13.11□□□□□ -0.31
PCDHB3-201ENST00000231130 ATF1P18846 271 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms