RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	NIPAL3	Q6P499	406 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HIST3H2A	Q7L7L0	130 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	CDH26	Q8IXH8	852 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	C7orf61	Q8IZ16	206 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	C17orf47	Q8NEP4	570 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DIO2	Q92813	273 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HIST1H2AC	Q93077	130 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	WDR89	Q96FK6	387 aa	Predicted RBP	12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	OR2A7	Q96R45	310 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TRMT61B	Q9BVS5	477 aa	Known RBP	12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	QRSL1	Q9H0R6	528 aa	Known RBP	12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	CACYBP	Q9HB71	228 aa	Known RBP	12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	MPTX1	A8MV57	137 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FLRT2	O43155	660 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FGB	P02675	491 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	NDUFV2	P19404	249 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	PABPC1L2A	Q5JQF8	200 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TPGS2	Q68CL5	300 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FAM129C	Q86XR2	697 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	MCAT	Q8IVS2	390 aa	Known RBP	12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	NRM	Q8IXM6	262 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TEX19	Q8NA77	164 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	CXorf40A	Q8TE69	158 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	NRTN	Q99748	197 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FAM83C	Q9BQN1	747 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FN3K	Q9H479	309 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514	MLX	Q9UH92	298 aa		12.68	□□□□□ -0.38
KCNMA1-238	ENST00000638514		J3QLW9	94 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SSX5	O60225	188 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SC5D	O75845	299 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SIX6	O95475	246 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ZNF19	P17023	458 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	PRLHR	P49683	370 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HENMT1	Q5T8I9	393 aa	Known RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SLC8B1	Q6J4K2	584 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	CORO6	Q6QEF8	472 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	APOOL	Q6UXV4	268 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	NHLRC1	Q6VVB1	395 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HTR3D	Q70Z44	454 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SYT9	Q86SS6	491 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	NKAIN4	Q8IVV8	208 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	OR9A1P	Q8NGU1	263 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ACOT11	Q8WXI4	607 aa	Predicted RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	IRF7	Q92985	503 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	F2RL3	Q96RI0	385 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SLC19A3	Q9BZV2	496 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ANKRD19P	Q9H560	264 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SLC6A20	Q9NP91	592 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	CTSF	Q9UBX1	484 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FXYD6-FXYD2	A0A087WZ82	144 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514		A0A1B0GW55	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514		A0A1W2PPK0	400 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HMSD	A8MTL9	139 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	KHDRBS3	O75525	346 aa	Known RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	REM1	O75628	298 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	POP7	O75817	140 aa	Known RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4L2	P0CJ85	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4L3	P0CJ86	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4L4	P0CJ87	422 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4L5	P0CJ88	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4L6	P0CJ89	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4L7	P0CJ90	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	CENPA	P49450	140 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	STXBP1	P61764	594 aa	Known RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TMEM115	Q12893	351 aa	Predicted RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ZNF311	Q5JNZ3	666 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	OR5M9	Q8NGP3	310 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	OR13C5	Q8NGS8	318 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	FXYD6	Q9H0Q3	95 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	PLEKHA1	Q9HB21	404 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TAS2R5	Q9NYW4	299 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	DUX4	Q9UBX2	424 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TAC3	Q9UHF0	121 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SPTBN2	O15020	2390 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3D	A0A087WVF3	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3I	A0A087WXS9	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3E	A0A087X179	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3K	A0A087X1G2	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514		A0A0G2JPF8	293 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HNRNPCL3	B7ZW38	293 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3L	B9A6J9	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3H	P0C7X1	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HNRNPCL4	P0DMR1	293 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ANXA7	P20073	488 aa	Known RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	METAP1	P53582	386 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	UBE2NL	Q5JXB2	153 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TMEM31	Q5JXX7	168 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	ZNF626	Q68DY1	528 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3G	Q6DHY5	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3C	Q6IPX1	549 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	SLC39A5	Q6ZMH5	540 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	TRAM1L1	Q8N609	369 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	NANP	Q8TBE9	248 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	LGALS14	Q8TCE9	139 aa		12.67	□□□□□ -0.38
KCNMA1-238	ENST00000638514	HMGB4	Q8WW32	186 aa		12.67	□□□□□ -0.38

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