RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 KRT34O76011 436 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 PLGP00747 810 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 C8BP07358 591 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 NUDT7P0C024 238 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 DRD4P21917 467 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 BMP5P22003 454 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 SFTPDP35247 375 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 IDH2P48735 452 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 ZNF136P52737 540 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 RAC3P60763 192 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 NCALDP61601 193 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 VEZF1Q14119 521 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 TOMM34Q15785 309 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 CTU2Q2VPK5 515 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 SYT14P1Q58G82 188 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 RPS26P11Q5JNZ5 115 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 C5orf46Q6UWT4 87 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 HACD2Q6Y1H2 254 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 NCCRP1Q6ZVX7 275 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 OLIG3Q7RTU3 272 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 MTDHQ86UE4 582 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 VRK2Q86Y07 508 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 ARMC8Q8IUR7 673 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 MCEMP1Q8IX19 187 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 C9orf106Q8NAJ2 232 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 OSTF1Q92882 214 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 DDIT4LQ96D03 193 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 CCDC106Q9BWC9 280 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 IKZF5Q9H5V7 419 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 NANOGQ9H9S0 305 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 ARMCX1Q9P291 453 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 TESQ9UGI8 421 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 EMC9Q9Y3B6 208 aa12.58□□□□□ -0.4
SNRPA1-216ENST00000626000 A0A0J9YW62 118 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 SHISA8B8ZZ34 492 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 FXYD1O00168 92 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 SYT5O00445 386 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 TNFSF11O14788 317 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 MSTNO14793 375 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 COX4I1P13073 169 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 RNF144AP50876 292 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 PCBP3P57721 371 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 SORDQ00796 357 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 ADRM1Q16186 407 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 VMACQ2NL98 169 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 TMEM176BQ3YBM2 270 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 SP5Q6BEB4 398 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 FNDC9Q8TBE3 224 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 RNASE6Q93091 150 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 INTS12Q96CB8 462 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 TRIM2Q9C040 744 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 ENKD1Q9H0I2 346 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 TMEM185BQ9H7F4 350 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 C12orf10Q9HB07 376 aa12.57□□□□□ -0.4
SNRPA1-216ENST00000626000 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 CLDN24A6NM45 220 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 EEF1E1O43324 174 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 CXCL13O43927 109 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 PMS2P2O95744 297 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 TGM6O95932 706 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 CXCR1P25024 350 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 MNAT1P51948 309 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 CTBP2P56545 445 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 TFF3Q07654 80 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 SF3A3Q12874 501 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■■■■■ 43
SNRPA1-216ENST00000626000 CAPRIN1Q14444 709 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 ZNF239Q16600 458 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 GKAP1Q5VSY0 366 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 PPP4R4Q6NUP7 873 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 CCDC80Q76M96 950 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 PIGWQ7Z7B1 504 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 STK32CQ86UX6 486 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 RANBP3LQ86VV4 465 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 PTOV1Q86YD1 416 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 LSMEM1Q8N8F7 131 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 ANKS4BQ8N8V4 417 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 NAXEQ8NCW5 288 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 OR6K3Q8NGY3 331 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 OR10A6Q8NH74 314 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 RNF128Q8TEB7 428 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 RCN3Q96D15 328 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 LRRC37BQ96QE4 947 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 OR5B2Q96R09 309 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 RLIMQ9NVW2 624 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 SELENONQ9NZV5 590 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 KLHL9Q9P2J3 617 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 RPS6KB2Q9UBS0 482 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 TRAPPC4Q9Y296 219 aa12.56□□□□□ -0.4
SNRPA1-216ENST00000626000 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms