RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 RABGAP1LQ5R372 815 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 ARMCX2Q7L311 632 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 MRPL43Q8N983 215 aaKnown RBP2.02□□□□□ -2.09
VBP1-204ENST00000625964 NANPQ8TBE9 248 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 PAQR8Q8TEZ7 354 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 AENQ8WTP8 325 aaKnown RBP2.02□□□□□ -2.09
VBP1-204ENST00000625964 UCN3Q969E3 161 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 RPUSD4Q96CM3 377 aaKnown RBP2.02□□□□□ -2.09
VBP1-204ENST00000625964 TESK2Q96S53 571 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 DBNDD1Q9H9R9 158 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 NGBQ9NPG2 151 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 B3GNT2Q9NY97 397 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 NINJ2Q9NZG7 142 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 ATXN10Q9UBB4 475 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 CPS1P31327 1500 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 DISP1Q96F81 1524 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 ATP10AO60312 1499 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 SHANK2Q9UPX8 1470 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 RAI1Q7Z5J4 1906 aaPredicted RBP2.02□□□□□ -2.09
VBP1-204ENST00000625964 IGKV2D-24A0A075B6R9 120 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 GJE1A6NN92 205 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 KIF2AO00139 706 aaPredicted RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 SNAI2O43623 268 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PTBP3O95758 552 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 OPN1LWP04000 364 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 CSF2P04141 144 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 RPS2P15880 293 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 RCC1P18754 421 aaPredicted RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 PRDX3P30048 256 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 CD80P33681 288 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ADRA1AP35348 466 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PLK1P53350 603 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 LINC00315P59091 139 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 MAP2K1Q02750 393 aaPredicted RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 NIPAL3Q6P499 406 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ARSKQ6UWY0 536 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 SYVN1Q86TM6 617 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 HDDC3Q8N4P3 179 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 C15orf54Q8N8G6 183 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 OR51G2Q8NGK0 314 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 SELENOMQ8WWX9 145 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PIGCQ92535 297 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 CCDC47Q96A33 483 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 RAB7BQ96AH8 199 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ECT2Q9H8V3 914 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PLGRKTQ9HBL7 147 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 AIG1Q9NVV5 245 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 TREM2Q9NZC2 230 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 MTRF1LQ9UGC7 380 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 WARS2Q9UGM6 360 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 CAMSAP1Q5T5Y3 1602 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 FRMPD1Q5SYB0 1578 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PLA2R1Q13018 1463 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 TCOF1Q13428 1488 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 RAPGEF2Q9Y4G8 1499 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 CARMIL1Q5VZK9 1371 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 KIAA0556O60303 1618 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 THSD7BQ9C0I4 1608 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ALKQ9UM73 1620 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 IGKV6-21A0A0C4DH24 114 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ESYT2A0FGR8 921 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 KRT87PA6NCN2 255 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ANKRD63C9JTQ0 380 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 SDHDO14521 159 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ECI2O75521 394 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 GNA14O95837 355 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 IGF1P05019 195 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 DNAJB1P25685 340 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 GMFBP60983 142 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 SLC5A12Q1EHB4 618 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 C1orf146Q5VVC0 180 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 CATSPER4Q7RTX7 472 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 DPY19L4Q7Z388 723 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 C16orf62Q7Z3J2 963 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ZNF429Q86V71 674 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 FAM9BQ8IZU0 186 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 GCNT2Q8N0V5 402 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 MDS2Q8NDY4 140 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PNPT1Q8TCS8 783 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 PGLYRP4Q96LB8 373 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 KCNK16Q96T55 309 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 GAL3ST1Q99999 423 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 RASL11BQ9BPW5 248 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 KLHDC3Q9BQ90 382 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 VCXQ9H320 206 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 ZNF385DQ9H6B1 395 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 SLC25A22Q9H936 323 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 B9D1Q9UPM9 204 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 PIN4Q9Y237 131 aaKnown RBP2.01□□□□□ -2.09
VBP1-204ENST00000625964 ZFYVE16Q7Z3T8 1539 aa2.01□□□□□ -2.09
VBP1-204ENST00000625964 FAM135BQ49AJ0 1406 aa2□□□□□ -2.09
VBP1-204ENST00000625964 C9orf84Q5VXU9 1444 aa2□□□□□ -2.09
VBP1-204ENST00000625964 ATP10BO94823 1461 aa2□□□□□ -2.09
VBP1-204ENST00000625964 EFCAB5A4FU69 1503 aa2□□□□□ -2.09
VBP1-204ENST00000625964 A0A0G2JRQ6 117 aa2□□□□□ -2.09
VBP1-204ENST00000625964 ICOSLGO75144 302 aa2□□□□□ -2.09
VBP1-204ENST00000625964 SEC22BO75396 215 aa2□□□□□ -2.09
VBP1-204ENST00000625964 UGT2B17O75795 530 aa2□□□□□ -2.09
VBP1-204ENST00000625964 OR4F21O95013 312 aa2□□□□□ -2.09
VBP1-204ENST00000625964 ARF4P18085 180 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms