RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-208	ENST00000622960	TEX37	Q96LM6	180 aa		11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	KLHDC3	Q9BQ90	382 aa		11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	SAP130	Q9H0E3	1048 aa		11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	QRSL1	Q9H0R6	528 aa	Known RBP	11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	COQ10B	Q9H8M1	238 aa		11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	KCNE5	Q9UJ90	142 aa		11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	PCNX3	Q9H6A9	2034 aa		11.65	□□□□□ -0.54
ATRX-208	ENST00000622960	F8	P00451	2351 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	IGHV3-15	A0A0B4J1V0	119 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	CENPVL1	A0A0U1RR11	272 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	DEFB108A	A8MXU0	73 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	FES	P07332	822 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	CLK1	P49759	484 aa	Known RBP	11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	POLR2J	P52435	117 aa	Known RBP	11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	COPZ1	P61923	177 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	CHRNE	Q04844	493 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	P2RY6	Q15077	328 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	MAPK14	Q16539	360 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	SYPL1	Q16563	259 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	SLC9B1	Q4ZJI4	515 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	LIN52	Q52LA3	116 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	SHE	Q5VZ18	495 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	TFAP2E	Q6VUC0	442 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	SSX8	Q7RTT4	187 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	CXorf67	Q86X51	503 aa	Predicted RBP	11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	ZNF100	Q8IYN0	542 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	FAM71C	Q8NEG0	241 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	PIGX	Q8TBF5	258 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	ZNF75CP	Q92670	426 aa	Predicted RBP	11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	INPP5K	Q9BT40	448 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	HDGFL3	Q9Y3E1	203 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	USH1C	Q9Y6N9	552 aa		11.64	□□□□□ -0.55
ATRX-208	ENST00000622960	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	AGAP5	A6NIR3	686 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	GPR171	O14626	319 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	DNPH1	O43598	174 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	EFNA2	O43921	213 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	CYTIP	O60759	359 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	DNAJA2	O60884	412 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	PMS2P2	O95744	297 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ZCCHC18	P0CG32	403 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	NID1	P14543	1247 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	CD53	P19397	219 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	IL12A	P29459	219 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	CDKN2C	P42773	168 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	IDH2	P48735	452 aa	Known RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	POLR2H	P52434	150 aa	Known RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	MAP2K6	P52564	334 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	DSTN	P60981	165 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	NKX6-1	P78426	367 aa	Predicted RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	FUT5	Q11128	374 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	CAPRIN1	Q14444	709 aa	Known RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	LARS2	Q15031	903 aa	Known RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ACKR1	Q16570	336 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ZSWIM7	Q19AV6	140 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	TMPPE	Q6ZT21	453 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	GALNT5	Q7Z7M9	940 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ANKFN1	Q8N957	763 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ATP6V1G3	Q96LB4	118 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	C7orf26	Q96N11	449 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	PIP5K1A	Q99755	562 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	PSD2	Q9BQI7	771 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	CCDC106	Q9BWC9	280 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	POTEKP	Q9BYX7	375 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	SLC38A1	Q9H2H9	487 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ESRP2	Q9H6T0	727 aa	Known RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	BCO1	Q9HAY6	547 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	TCF7L2	Q9NQB0	619 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	CTPS2	Q9NRF8	586 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	ZNF232	Q9UNY5	417 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	MPDZ	O75970	2070 aa		11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	NUP214	P35658	2090 aa	Predicted RBP	11.63	□□□□□ -0.55
ATRX-208	ENST00000622960	SPG11	Q96JI7	2443 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	FAM234B	A2RU67	622 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	CFAP73	A6NFT4	308 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	ZNF724	A8MTY0	619 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	C5orf58	C9J3I9	102 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	SMAD9	O15198	467 aa	Known RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	EIF1B	O60739	113 aa	Known RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	TGDS	O95455	350 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	ADA	P00813	363 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	BCHE	P06276	602 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	CHRM4	P08173	479 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	FOSL1	P15407	271 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	NCF2	P19878	526 aa	Predicted RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	CCNA2	P20248	432 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	FOXD4	Q12950	439 aa	Predicted RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	ITGAD	Q13349	1161 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	SFRP5	Q5T4F7	317 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	MRPL2	Q5T653	305 aa	Known RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960		Q6ZT83	130 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	NUFIP2	Q7Z417	695 aa	Known RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	HMGN2P46	Q86SG4	172 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	MTDH	Q86UE4	582 aa	Known RBP	11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	LRRC75A-AS1	Q8N1F1	130 aa		11.62	□□□□□ -0.55
ATRX-208	ENST00000622960	UBE2J2	Q8N2K1	259 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms