RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MOSPD1Q9UJG1 213 aa4.33□□□□□ -1.72
VPS29-212ENST00000621131 PRPF19Q9UMS4 504 aaKnown RBP4.33□□□□□ -1.72
VPS29-212ENST00000621131 PDE10AQ9Y233 779 aa4.33□□□□□ -1.72
VPS29-212ENST00000621131 NDUFAF1Q9Y375 327 aa4.33□□□□□ -1.72
VPS29-212ENST00000621131 DNAJC15Q9Y5T4 150 aa4.33□□□□□ -1.72
VPS29-212ENST00000621131 HEBP2Q9Y5Z4 205 aa4.33□□□□□ -1.72
VPS29-212ENST00000621131 MYO9AB2RTY4 2548 aa4.33□□□□□ -1.72
VPS29-212ENST00000621131 COL4A2P08572 1712 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 LOC100653049A0A140TA62 436 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 TCRBV21S2A2A0A5A6 115 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SLC5A10A0PJK1 596 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 MEI4A8MW99 385 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 GFYI3L273 518 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 MANBAO00462 879 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 UBFD1O14562 309 aaKnown RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 MRASO14807 208 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 AIM2O14862 343 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 MGRN1O60291 552 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 PEX11AO75192 247 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 FKBP6O75344 327 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 KRT34O76011 436 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CCNDBP1O95273 360 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ATP6V1G2O95670 118 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CAPN1P07384 714 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 IL9P15248 144 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CDH2P19022 906 aaPredicted RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 ZNF10P21506 573 aaPredicted RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 OXTRP30559 389 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SERPINB1P30740 379 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 DRD3P35462 400 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 HNF4AP41235 474 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 BDKRB1P46663 353 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ACADVLP49748 655 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CLNS1AP54105 237 aaKnown RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 KIAA1024LP59773 190 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CDK3Q00526 305 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 IRF8Q02556 426 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ABRQ12979 859 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 TSTA3Q13630 321 aaPredicted RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 IRF4Q15306 451 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 PHKG1Q16816 387 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 GTDC1Q4AE62 458 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 GGTA1PQ4G0N0 100 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 XKR6Q5GH73 641 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 COQ5Q5HYK3 327 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 LIPJQ5W064 366 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CYHR1Q6ZMK1 362 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CFAP77Q6ZQR2 320 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 RFLNAQ6ZTI6 216 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 RPS27LQ71UM5 84 aaKnown RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 TRIM69Q86WT6 500 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CFAP206Q8IYR0 622 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 DEFB107AQ8IZN7 70 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 PGAM4Q8N0Y7 254 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 PPFIBP2Q8ND30 876 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 OR2T34Q8NGX1 318 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 RPLP0P6Q8NHW5 317 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SELENOMQ8WWX9 145 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 UBE2E3Q969T4 207 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 RAD51AP1Q96B01 352 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 RCN3Q96D15 328 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 VGLL1Q99990 258 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 TIMM29Q9BSF4 260 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 THTPAQ9BU02 230 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 EFCAB11Q9BUY7 163 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SLC17A9Q9BYT1 436 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 PCBD2Q9H0N5 130 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 VCX3BQ9H321 246 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 OSGEPL1Q9H4B0 414 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SGK2Q9HBY8 427 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 CCDC177Q9NQR7 707 aaPredicted RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 PLCXD1Q9NUJ7 323 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ATXN10Q9UBB4 475 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 LEF1Q9UJU2 399 aaPredicted RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 IKZF3Q9UKT9 509 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ANGPTL2Q9UKU9 493 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ZNF490Q9ULM2 529 aaPredicted RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 MMP17Q9ULZ9 603 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 ASF1AQ9Y294 204 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 BTRCQ9Y297 605 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 EXOGQ9Y2C4 368 aaKnown RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 TMED5Q9Y3A6 229 aa4.32□□□□□ -1.72
VPS29-212ENST00000621131 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.32□□□□□ -1.72
VPS29-212ENST00000621131 IGHV4-61A0A0C4DH41 118 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 ATP6AP2A0A1C7CYW4 349 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 TMEM221A6NGB7 291 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 LIPT2A6NK58 231 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 PDZK1P1A8MUH7 402 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 ARHGEF33A8MVX0 844 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 M0R296 226 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 CFLARO15519 480 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 TAPBPO15533 448 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 PI15O43692 258 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 SEC22BO75396 215 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 GMNNO75496 209 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 ATP6AP2O75787 350 aa4.31□□□□□ -1.72
VPS29-212ENST00000621131 POP7O75817 140 aaKnown RBP4.31□□□□□ -1.72
VPS29-212ENST00000621131 RSL1D1O76021 490 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms