RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CAPZA2P47755 286 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 CCR9P51686 369 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 ACTC1P68032 377 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 ACTA1P68133 377 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 TP53I3Q53FA7 332 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 PRSS42Q7Z5A4 293 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 CMTM4Q8IZR5 234 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 OR2L3Q8NG85 312 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 ING5Q8WYH8 240 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 LCORQ96JN0 433 aaPredicted RBP18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 ARPC5LQ9BPX5 153 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 WDR26Q9H7D7 661 aa18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 AK6Q9Y3D8 172 aaKnown RBP18.1■□□□□ 0.49
PDLIM3-212ENST00000620787 IGLON5A6NGN9 336 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 A8MUA0 341 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 TRIM77I1YAP6 450 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 STX11O75558 287 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 UCHL1P09936 223 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 PEBP1P30086 187 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 GDI2P50395 445 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 HCCSP53701 268 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 TSPAN5P62079 268 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 RPS11P62280 158 aaKnown RBP eCLIP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 UBE2NLQ5JXB2 153 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 CHMP1BQ7LBR1 199 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 SRFBP1Q8NEF9 429 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 SLC2A12Q8TD20 617 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 COL26A1Q96A83 441 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 SARGQ9BW04 601 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 MFRPQ9BY79 579 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 PLEKHA1Q9HB21 404 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 HRASLSQ9HDD0 168 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 NPDC1Q9NQX5 325 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 NANSQ9NR45 359 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 RCE1Q9Y256 329 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 TUBAL3A6NHL2 446 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 MAGEB4O15481 346 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 CLTBP09497 229 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 TYRP1P17643 537 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 RPS4Y1P22090 263 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 VEGFCP49767 419 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 BTN3A2P78410 334 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 CAMK1Q14012 370 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 CDK5R1Q15078 307 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 TCTE1Q5JU00 501 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 MRPL2Q5T653 305 aaKnown RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 FAM69AQ5T7M9 428 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 LRRC25Q8N386 305 aaPredicted RBP18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 MFSD9Q8NBP5 474 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 SMIM19Q96E16 107 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 SCML1Q9UN30 329 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 OR1A2Q9Y585 309 aa18.09■□□□□ 0.49
PDLIM3-212ENST00000620787 SCN2AQ99250 2005 aa18.08■□□□□ 0.49
PDLIM3-212ENST00000620787 HIDE1A8MVS5 230 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 BET1O15155 118 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 PRAF2O60831 178 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ARL6IP5O75915 188 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 PPP1R3DO95685 299 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF3P17036 446 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 SNRPNP63162 240 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OPCMLQ14982 345 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 KANSL1Q7Z3B3 1105 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 GRAMD2AQ8IUY3 354 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ETFBKMTQ8IXQ9 262 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OR2L13Q8N349 312 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OR52E1Q8NGJ3 308 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 GCDHQ92947 438 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 PELI1Q96FA3 418 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 RAB11FIP5Q9BXF6 653 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 SPHK1Q9NYA1 384 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 RDH8Q9NYR8 311 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 KIF25Q9UIL4 384 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 PTPRSQ13332 1948 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 PTP4A3O75365 173 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 TFP02787 698 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ACSM4P0C7M7 580 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 PSMB1P20618 241 aaKnown RBP18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 DHODHQ02127 395 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 BAMBIQ13145 260 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF234Q14588 700 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 LINGO2Q7L985 606 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OVCH1Q7RTY7 1134 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 DGLUCYQ7Z3D6 616 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ARL14Q8N4G2 192 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 SLAIN1Q8ND83 568 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 FAM71CQ8NEG0 241 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OR51A7Q8NH64 312 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OR4C6Q8NH72 309 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF671Q8TAW3 534 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OR14A2Q96R54 314 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 REG4Q9BYZ8 158 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF350Q9GZX5 532 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 OR10A4Q9H209 315 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 MEPEQ9NQ76 525 aaPredicted RBP18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 KCNE5Q9UJ90 142 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 KCNK6Q9Y257 313 aa18.08■□□□□ 0.48
PDLIM3-212ENST00000620787 TBC1D3EA0A087X179 549 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 A0A1B0GUH1 482 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 ZNF749O43361 778 aa18.07■□□□□ 0.48
PDLIM3-212ENST00000620787 HOXD4P09016 255 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms