RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	CCDC115	Q96NT0	180 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	KCNJ16	Q9NPI9	418 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ERVK13-1	Q9NX77	482 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		Q9UFV3	132 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	RNF11	Q9Y3C5	154 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PTGDR2	Q9Y5Y4	395 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PTPRQ	Q9UMZ3	2332 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		A0A096LPI6	279 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		A0A0X1KG70	313 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		A0A1W2PP18	115 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	DEFB108A	A8MXU0	73 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SMLR1	H3BR10	107 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TFEC	O14948	347 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR1I1	O60431	355 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	EIF4E2	O60573	245 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SIX3	O95343	332 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	AGR2	O95994	175 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	GLA	P06280	429 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CD3E	P07766	207 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	UROS	P10746	265 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ATP6V1B2	P21281	511 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TBXA2R	P21731	343 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	UQCRC1	P31930	480 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	VLDLR	P98155	873 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PPP1R8	Q12972	351 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TRAF3	Q13114	568 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PMS2P3	Q13401	168 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	MRPL49	Q13405	166 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	P2RY6	Q15077	328 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF141	Q15928	474 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PPP4R4	Q6NUP7	873 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	DLEU7	Q6UYE1	221 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		Q6ZSR9	355 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	USP51	Q70EK9	711 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR9I1	Q8NGQ6	314 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TBC1D15	Q8TC07	691 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SMIM14	Q96QK8	99 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SEC22C	Q9BRL7	303 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	OSGEPL1	Q9H4B0	414 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PRTFDC1	Q9NRG1	225 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	AHSP	Q9NZD4	102 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZIM2	Q9NZV7	527 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ACTR3B	Q9P1U1	418 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ERVK-11	Q9UQG0	969 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	NDUFAF1	Q9Y375	327 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CHD3	Q12873	2000 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ASXL3	Q9C0F0	2248 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TRBV23-1	A0A0A0MS06	115 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	C4orf51	C9J302	202 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322		C9JVG2	144 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CDC7	O00311	574 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SCAMP2	O15127	329 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF208	O43345	1280 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SNX2	O60749	519 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	GTF2E2	P29084	291 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	RPL35	P42766	123 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	BDKRB1	P46663	353 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	GZMM	P51124	257 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PSMD4	P55036	377 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	P2RX3	P56373	397 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	RPS18	P62269	152 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	BNIP2	Q12982	314 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	RUNX2	Q13950	521 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ATP6AP1	Q15904	470 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ACKR1	Q16570	336 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PRR30	Q53SZ7	412 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SAMD4B	Q5PRF9	694 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	MED27	Q6P2C8	311 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TRIM40	Q6P9F5	258 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TTLL10	Q6ZVT0	673 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ADGRG5	Q8IZF4	528 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMEM251	Q8N6I4	163 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CCNYL1	Q8N7R7	359 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	LSMEM1	Q8N8F7	131 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	PHF21B	Q96EK2	531 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	KCNA7	Q96RP8	456 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMEM246	Q9BRR3	403 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	REXO4	Q9GZR2	422 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	CXorf21	Q9HAI6	301 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	C8orf4	Q9NR00	106 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	NKIRAS2	Q9NYR9	191 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	LRFN1	Q9P244	771 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	SPRR3	Q9UBC9	169 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	WARS2	Q9UGM6	360 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	MRTO4	Q9UKD2	239 aa	Known RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	NAALAD2	Q9Y3Q0	740 aa		4.87	□□□□□ -1.63
CBWD3-215	ENST00000619322	ARHGAP10	A1A4S6	786 aa		4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	UPK1A	O00322	258 aa		4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	CASC3	O15234	703 aa	Known RBP	4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	TACSTD2	P09758	323 aa		4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	FAM58BP	P0C7Q3	252 aa		4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	POU2F1	P14859	743 aa		4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	CSNK2A2	P19784	350 aa	Predicted RBP	4.86	□□□□□ -1.63
CBWD3-215	ENST00000619322	HMOX2	P30519	316 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms