RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ZNF347Q96SE7 839 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 EPYCQ99645 322 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CIB1Q99828 191 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TRIM2Q9C040 744 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 ARMC7Q9H6L4 198 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 YY1AP1Q9H869 796 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 REEP1Q9H902 201 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TIMMDC1Q9NPL8 285 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 KLHL1Q9NR64 748 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 ASF1BQ9NVP2 202 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 TAS2R10Q9NYW0 307 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 CNIH4Q9P003 139 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 SLC7A7Q9UM01 511 aa7.29□□□□□ -1.24
PCDH9-205ENST00000614931 IGKV1D-42A0A075B6H8 117 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 A0A087WUU8 490 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 A0A1W2PRQ8 180 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SH3PXD2BA1X283 911 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 CYSRT1A8MQ03 144 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ETV2O00321 342 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 DLGAP1O14490 977 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 GNGT2O14610 69 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ADAMDEC1O15204 470 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 EFNA2O43921 213 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 NME2P1O60361 137 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 NUDT14O95848 222 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SP1P08047 785 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 RFPL3SP0C7P2 107 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF23P17027 643 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PRKCAP17252 672 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 IL11P20809 199 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 NME2P22392 152 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 DNAJA1P31689 397 aaKnown RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SLC6A8P48029 635 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PTDSS1P48651 473 aaKnown RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 TNFSF10P50591 281 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SUMO3P55854 103 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 DLX5P56178 289 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 RPP38P78345 283 aaKnown RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ARG2P78540 354 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PMP22Q01453 160 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 FOXF1Q12946 379 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 DGCR6Q14129 220 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PLPPR5Q32ZL2 321 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 FGD3Q5JSP0 725 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 TIGD3Q6B0B8 471 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF770Q6IQ21 691 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SLC25A25Q6KCM7 469 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PODNL1Q6PEZ8 512 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF613Q6PF04 617 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 LINC00114Q6XXX2 140 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 GALNTL5Q7Z4T8 443 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ATG4DQ86TL0 474 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 P3H2Q8IVL5 708 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 OR2M7Q8NG81 312 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 OR4K17Q8NGC6 315 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PFN4Q8NHR9 129 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 TMEM255BQ8WV15 326 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF597Q96LX8 424 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 JSRP1Q96MG2 331 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 GNRHR2Q96P88 292 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ALPK1Q96QP1 1244 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 FNDC11Q9BVV2 318 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 POLR2J2Q9GZM3 115 aaKnown RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 GABARAPL1Q9H0R8 117 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 POLR2J3Q9H1A7 115 aaKnown RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 COQ10BQ9H8M1 238 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SMURF2Q9HAU4 748 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 TMEM27Q9HBJ8 222 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 MED17Q9NVC6 651 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 TMEFF2Q9UIK5 374 aaPredicted RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 OSGIN1Q9UJX0 560 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 VDAC3Q9Y277 283 aa7.28□□□□□ -1.24
PCDH9-205ENST00000614931 FAM32AQ9Y421 112 aaKnown RBP7.28□□□□□ -1.24
PCDH9-205ENST00000614931 SETXQ7Z333 2677 aaKnown RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 TMEM72A0PK05 275 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 EI24O14681 340 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 CHP2O43745 196 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 PEX1O43933 1283 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 E2F6O75461 281 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SNX4O95219 450 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 GP1BBP13224 206 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF26P17031 533 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 PGCP20142 388 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ENDOUP21128 410 aaKnown RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 MSX1P28360 303 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 TACR3P29371 465 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 GCKP35557 465 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 MASP1P48740 699 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 MEOX1P50221 254 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 DAPP51397 102 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ST3GAL3Q11203 375 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 MRPL49Q13405 166 aaKnown RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 CBFBQ13951 182 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF169Q14929 603 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms