RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 A0A087WUU8 490 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 ANKUB1A6NFN9 424 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 CHP2O43745 196 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 NEURL1O76050 574 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 SNX4O95219 450 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 NTN1O95631 604 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 CDH2P19022 906 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 SUMO3P55854 103 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 CD47Q08722 323 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 IL18R1Q13478 541 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 OR1C1Q15619 314 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 BROXQ5VW32 411 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 WDSUB1Q8N9V3 476 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 SIGLEC12Q96PQ1 595 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 PITX2Q99697 317 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 PAPOLBQ9NRJ5 636 aaKnown RBP12.53□□□□□ -0.4
TMEM254-213ENST00000613758 POFUT2Q9Y2G5 429 aa12.53□□□□□ -0.4
TMEM254-213ENST00000613758 HEATR5AQ86XA9 2040 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 GNB5O14775 395 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 CDC40O60508 579 aaKnown RBP eCLIP12.52□□□□□ -0.4
TMEM254-213ENST00000613758 GP1BBP13224 206 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 CNR1P21554 472 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 SLC1A3P43003 542 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 CDH15P55291 814 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 TLE3Q04726 772 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 QPRTQ15274 297 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 ZNF730Q6ZMV8 503 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 PLCZ1Q86YW0 608 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 CCDC71Q8IV32 467 aaPredicted RBP12.52□□□□□ -0.4
TMEM254-213ENST00000613758 AQP11Q8NBQ7 271 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 TSPAN14Q8NG11 270 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 OR2M3Q8NG83 312 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 OR4K17Q8NGC6 315 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 OR4K5Q8NGD3 323 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 TMEM255BQ8WV15 326 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 C3orf49Q96BT1 292 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 TAS2R10Q9NYW0 307 aa12.52□□□□□ -0.4
TMEM254-213ENST00000613758 OR5H15A6NDH6 313 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 TRIM64CA6NLI5 447 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 OR10H3O60404 316 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 CEACAM4O75871 244 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 ATP6V1B1P15313 513 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 MST1P26927 711 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
TMEM254-213ENST00000613758 MASP1P48740 699 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM254-213ENST00000613758 LRRC69Q6ZNQ3 347 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 Q6ZPB1 254 aaPredicted RBP12.52□□□□□ -0.41
TMEM254-213ENST00000613758 RRM2BQ7LG56 351 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 LINC00471Q8N535 108 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 FADS6Q8N9I5 356 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 ACOT11Q8WXI4 607 aaPredicted RBP12.52□□□□□ -0.41
TMEM254-213ENST00000613758 HAS2Q92819 552 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 MPP4Q96JB8 637 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
TMEM254-213ENST00000613758 ADAM19Q9H013 955 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 RNF32Q9H0A6 362 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 FBXL2Q9UKC9 423 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
TMEM254-213ENST00000613758 SLC25A12O75746 678 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 CLPTM1O96005 669 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 POU2F1P14859 743 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 DNASE1L1P49184 302 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 FOXB2Q5VYV0 432 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 PGBD2Q6P3X8 592 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 ARSKQ6UWY0 536 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 LINC00114Q6XXX2 140 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 OR1J4Q8NGS1 313 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
TMEM254-213ENST00000613758 TMEM41AQ96HV5 264 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 HRASLS5Q96KN8 279 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 JSRP1Q96MG2 331 aaPredicted RBP12.51□□□□□ -0.41
TMEM254-213ENST00000613758 HS6ST2Q96MM7 605 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 PTGES2Q9H7Z7 377 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 GMPPBQ9Y5P6 360 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 APC2O95996 2303 aa12.51□□□□□ -0.41
TMEM254-213ENST00000613758 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 A0A0G2JMM0 328 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 A0A1W2PPB8 328 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 A0A1W2PRS3 328 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 KIR3DP1A8MWS1 328 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 SNPHO15079 494 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 TRIM3O75382 744 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 PNMTP11086 282 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 TACR3P29371 465 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 RPS6KA3P51812 740 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ZNF41P51814 821 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 TPD52P55327 224 aaPredicted RBP12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ARG2P78540 354 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 CDK5R2Q13319 367 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 MBOAT2Q6ZWT7 520 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 PRICKLE2Q7Z3G6 844 aa12.5□□□□□ -0.41
TMEM254-213ENST00000613758 ATG4DQ86TL0 474 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms