RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 BNIP2Q12982 314 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 SELENBP1Q13228 472 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ADRM1Q16186 407 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 EXOC3L2Q2M3D2 409 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 HSP90B2PQ58FF3 399 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 RUNDC3AQ59EK9 446 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ANKRD34AQ69YU3 496 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 NUFIP2Q7Z417 695 aaKnown RBP11.31□□□□□ -0.6
CSTF1-208ENST00000613138 DHDDSQ86SQ9 333 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 SERPINA11Q86U17 422 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ADGRG3Q86Y34 549 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 C10orf82Q8WW14 230 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 STON2Q8WXE9 905 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ST8SIA1Q92185 356 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ZNF317Q96PQ6 595 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ZNF559Q9BR84 538 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 GPATCH1Q9BRR8 931 aaKnown RBP11.31□□□□□ -0.6
CSTF1-208ENST00000613138 LIME1Q9H400 295 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 PIF1Q9H611 641 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 A4GALTQ9NPC4 353 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ARMCX1Q9P291 453 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ING1Q9UK53 422 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-208ENST00000613138 USP22Q9UPT9 525 aa11.31□□□□□ -0.6
CSTF1-208ENST00000613138 ALPK2Q86TB3 2170 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 CDHR4A6H8M9 788 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 PGM3O95394 542 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
CSTF1-208ENST00000613138 TFPIP10646 304 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 BMP2P12643 396 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 ADH6P28332 368 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 TACR3P29371 465 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 KLF10Q13118 480 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 POU4F3Q15319 338 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 FCRLAQ7L513 359 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 TMEM200AQ86VY9 491 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 PTOV1Q86YD1 416 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 TUSC5Q8IXB3 177 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 ZNF300Q96RE9 604 aaPredicted RBP11.3□□□□□ -0.6
CSTF1-208ENST00000613138 CGREF1Q99674 301 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 CCDC134Q9H6E4 229 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 MCCC2Q9HCC0 563 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
CSTF1-208ENST00000613138 SAR1AQ9NR31 198 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 GMPR2Q9P2T1 348 aaKnown RBP11.3□□□□□ -0.6
CSTF1-208ENST00000613138 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
CSTF1-208ENST00000613138 OSGIN1Q9UJX0 560 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 MCTS1Q9ULC4 181 aaKnown RBP11.3□□□□□ -0.6
CSTF1-208ENST00000613138 NDUFAF1Q9Y375 327 aa11.3□□□□□ -0.6
CSTF1-208ENST00000613138 TMED7-TICAM2A0A0A6YYA0 188 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 CFAP73A6NFT4 308 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 SMAD9O15198 467 aaKnown RBP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 SS18L1O75177 396 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 GCM2O75603 506 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 PLGP00747 810 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 OPN1SWP03999 348 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 FESP07332 822 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 TROVE2P10155 538 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 PTNP21246 168 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 AGTR1P30556 359 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 SLC7A1P30825 629 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 DIO1P49895 249 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 SEC24CP53992 1094 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 TXNL4AP83876 142 aaKnown RBP11.29□□□□□ -0.6
CSTF1-208ENST00000613138 FADDQ13158 208 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 NFYCQ13952 458 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 SYT14P1Q58G82 188 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 ZNF311Q5JNZ3 666 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 OR2A2Q6IF42 318 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 C3orf33Q6P1S2 294 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 FAM214BQ7L5A3 538 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 DPP10Q8N608 796 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 RNF128Q8TEB7 428 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 PIGMQ9H3S5 423 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 KLHL28Q9NXS3 571 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 PROCRQ9UNN8 238 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 TRIM33Q9UPN9 1127 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 TMED7Q9Y3B3 224 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 OTOGQ6ZRI0 2925 aa11.29□□□□□ -0.6
CSTF1-208ENST00000613138 A0A0G2JPF8 293 aa11.28□□□□□ -0.6
CSTF1-208ENST00000613138 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
CSTF1-208ENST00000613138 TUBAL3A6NHL2 446 aa11.28□□□□□ -0.6
CSTF1-208ENST00000613138 HNRNPCL2B2RXH8 293 aa11.28□□□□□ -0.6
CSTF1-208ENST00000613138 HNRNPCL3B7ZW38 293 aa11.28□□□□□ -0.6
CSTF1-208ENST00000613138 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms