RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 KIAA1024LP59773 190 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PARGQ86W56 976 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TCTEX1D1Q8N7M0 179 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SLC6A20Q9NP91 592 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 KCMF1Q9P0J7 381 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 DCCP43146 1447 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 FOLR1P15328 257 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TNFSF9P41273 254 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SGSHP51688 502 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TMEM115Q12893 351 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 BTNL8Q6UX41 500 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PDZD7Q9H5P4 517 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 C2orf42Q9NWW7 574 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 GPR45Q9Y5Y3 372 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ATG2BQ96BY7 2078 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 RGPD1P0DJD0 1748 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 KCNK5O95279 499 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 GABRB1P18505 474 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SFTPDP35247 375 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 KDF1Q8NAX2 398 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 FAM213BQ8TBF2 198 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ACER1Q8TDN7 264 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TSLPQ969D9 159 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 KCNA7Q96RP8 456 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PLEKHA2Q9HB19 425 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TESQ9UGI8 421 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 ERI3O43414 337 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 AGXTP21549 392 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 FCRLBQ6BAA4 426 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PIM3Q86V86 326 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 A0A1W2PQH9 124 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 A8MVM7 634 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TACR3P29371 465 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 CLDN6P56747 220 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 GRB7Q14451 532 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 AMZ1Q400G9 498 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZNF648Q5T619 568 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 SLC8B1Q6J4K2 584 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 FAM217AQ8IXS0 508 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 MRPL17Q9NRX2 175 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZNF98A6NK75 572 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 NDUFS4O43181 175 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SMAD6O43541 496 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 CXADRP78310 365 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SIX1Q15475 284 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZNF791Q3KP31 576 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 TMEM244Q5VVB8 128 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TAC4Q86UU9 113 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SPICQ8N5J4 248 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 OR9A1PQ8NGU1 263 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 NEURL2Q9BR09 285 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZNF768Q9H5H4 540 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 A0A0A6YYJ9 748 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 C1orf226A1L170 272 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 HBA1P69905 142 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 FIGNL1Q6PIW4 674 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 DYNC2LI1Q8TCX1 351 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PRDM9Q9NQV7 894 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 GAB2Q9UQC2 676 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SMIM30A4D0T7 59 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PIM1P11309 404 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 ZNF16P17020 682 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 NAGAP17050 411 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SMAD3P84022 425 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 ACSM1Q08AH1 577 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 EBPQ15125 230 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 MEPCEQ7L2J0 689 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 ADGRE4PQ86SQ3 457 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SPTSSAQ969W0 71 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 IMP4Q96G21 291 aaKnown RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SUSD2Q9UGT4 822 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 B4DEV8 164 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR2T7P0C7T2 308 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 MLLT10P55197 1068 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 AGBL4Q5VU57 503 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 LETMD1Q6P1Q0 360 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 USP51Q70EK9 711 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 MAMDC2Q7Z304 686 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR2T27Q8NH04 317 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SLC12A9Q9BXP2 914 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 RRAGCQ9HB90 399 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 CYB5BO43169 146 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 CPEP16870 476 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 G0S2P27469 103 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 PCSK6P29122 969 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR1E2P47887 323 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 KIAA0319LQ8IZA0 1049 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 OR52P1PQ8NH57 321 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 ZNF442Q9H7R0 627 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 ACOXLQ9NUZ1 547 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 POMT2Q9UKY4 750 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 CACNA1IQ9P0X4 2223 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 GLTPD2A6NH11 291 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 SMUG1Q53HV7 270 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 LRRC25Q8N386 305 aaPredicted RBP8.24□□□□□ -1.09
TTC28-208ENST00000612946 BPIFB2Q8N4F0 458 aa8.24□□□□□ -1.09
TTC28-208ENST00000612946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.24□□□□□ -1.09
TTC28-208ENST00000612946 AK6Q9Y3D8 172 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms