RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 QRSL1Q9H0R6 528 aaKnown RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-208ENST00000612050 EMC3Q9P0I2 261 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 KCNE5Q9UJ90 142 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 CLEC4AQ9UMR7 237 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 NDUFAF1Q9Y375 327 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 HDGFL3Q9Y3E1 203 aa11.04□□□□□ -0.64
CBWD3-208ENST00000612050 ETV2O00321 342 aaPredicted RBP11.03□□□□□ -0.64
CBWD3-208ENST00000612050 DNPH1O43598 174 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 DNAJA2O60884 412 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 CTAG2O75638 210 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 SASH3O75995 380 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 NTN1O95631 604 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 IL11P20809 199 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 CXCR1P25024 350 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 NCALDP61601 193 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 MAPRE2Q15555 327 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF311Q5JNZ3 666 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 LRIF1Q5T3J3 769 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 GCNT6Q5T4J0 391 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 RNF220Q5VTB9 566 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 CRYBG3Q68DQ2 2970 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 HMGN2P46Q86SG4 172 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF610Q8N9Z0 462 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
CBWD3-208ENST00000612050 LINC01560Q8TB33 94 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 RNF128Q8TEB7 428 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 TSPEARQ8WU66 669 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 SLC38A5Q8WUX1 472 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 ROBO4Q8WZ75 1007 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 AURKBQ96GD4 344 aaPredicted RBP11.03□□□□□ -0.64
CBWD3-208ENST00000612050 TMEM19Q96HH6 336 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF607Q96SK3 696 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 NPAS1Q99742 590 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 GPATCH1Q9BRR8 931 aaKnown RBP11.03□□□□□ -0.64
CBWD3-208ENST00000612050 PAIP1Q9H074 479 aaKnown RBP11.03□□□□□ -0.64
CBWD3-208ENST00000612050 C12orf49Q9H741 205 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 A4GALTQ9NPC4 353 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 PLSCR4Q9NRQ2 329 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 KLHL28Q9NXS3 571 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 KLHL13Q9P2N7 655 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 RPS6KB2Q9UBS0 482 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
CBWD3-208ENST00000612050 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 A0A1W2PNR3 127 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 PRORSD1PA6NEY8 169 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 FAAHO00519 579 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 SERPINB7O75635 380 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 YES1P07947 543 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 TFPTP0C1Z6 253 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 RPS4Y1P22090 263 aaKnown RBP11.02□□□□□ -0.64
CBWD3-208ENST00000612050 SLC6A2P23975 617 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 AGTR1P30556 359 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 SLC1A3P43003 542 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 DIO1P49895 249 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 ARFIP2P53365 341 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 RASGEF1BQ0VAM2 473 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 MMEL1Q495T6 779 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 GTDC1Q4AE62 458 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 TMPPEQ6ZT21 453 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 CADM2Q8N3J6 435 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 CNOT9Q92600 299 aaKnown RBP11.02□□□□□ -0.64
CBWD3-208ENST00000612050 ZG16BQ96DA0 208 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.64
CBWD3-208ENST00000612050 NAA11Q9BSU3 229 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-208ENST00000612050 SPATA9Q9BWV2 254 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 HDHD5Q9BXW7 423 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 CTPS2Q9NRF8 586 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 SLC6A13Q9NSD5 602 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 SELENONQ9NZV5 590 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 ANGPT4Q9Y264 503 aa11.02□□□□□ -0.64
CBWD3-208ENST00000612050 ZNF443Q9Y2A4 671 aaPredicted RBP11.02□□□□□ -0.64
CBWD3-208ENST00000612050 TMED7-TICAM2A0A0A6YYA0 188 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 PRAMEF27A3QJZ7 478 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CDHR4A6H8M9 788 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 GPR171O14626 319 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF208O43345 1280 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 EIF1BO60739 113 aaKnown RBP11.01□□□□□ -0.65
CBWD3-208ENST00000612050 PMS2P2O95744 297 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ETS2P15036 469 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CCNA2P20248 432 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 DNASE1P24855 282 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 UGT2B10P36537 528 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 SLC35A1P78382 337 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 FAM27E3Q08E93 113 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 EPS8Q12929 822 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 NFYCQ13952 458 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
CBWD3-208ENST00000612050 WBP2NLQ6ICG8 309 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 REEP3Q6NUK4 255 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 DHDDSQ86SQ9 333 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 VRK2Q86Y07 508 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 FUNDC1Q8IVP5 155 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 PIGXQ8TBF5 258 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ABHD3Q8WU67 409 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 NINJ1Q92982 152 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms