RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 RNPS1Q15287 305 aaKnown RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 ADRM1Q16186 407 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 NANOGP8Q6NSW7 305 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF836Q6ZNA1 936 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 NET1Q7Z628 596 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 KIF18BQ86Y91 864 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 MED12LQ86YW9 2145 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 NFKBIDQ8NI38 313 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 FIG4Q92562 907 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 RNASE6Q93091 150 aaKnown RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 GMPPAQ96IJ6 420 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF845Q96IR2 970 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-206ENST00000608461 NANOGQ9H9S0 305 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 PACSIN3Q9UKS6 424 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 ANGPT4Q9Y264 503 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 AP3M1Q9Y2T2 418 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 CENPEQ02224 2701 aa12.81□□□□□ -0.36
HDDC2-206ENST00000608461 A0A1W2PNV4 684 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 MSTNO14793 375 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 MRASO14807 208 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF208O43345 1280 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 DNPH1O43598 174 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 CXCL13O43927 109 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 SNX3O60493 162 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 BCAS1O75363 584 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 TNFSF13O75888 250 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 IL11P20809 199 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 ACAA2P42765 397 aaKnown RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 POLR2HP52434 150 aaKnown RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 SEC24CP53992 1094 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 FOXF2Q12947 444 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 GUSBP1Q15486 140 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 CYP51A1Q16850 503 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 SYT14P1Q58G82 188 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 RPS26P11Q5JNZ5 115 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 INTS11Q5TA45 600 aaKnown RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 DHRS4L2Q6PKH6 230 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 SNX32Q86XE0 403 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 DMRTC2Q8IXT2 367 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 C10orf111Q8N326 155 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF524Q96C55 264 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 ELAC2Q9BQ52 826 aaKnown RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 ADAM19Q9H013 955 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 TMEM185BQ9H7F4 350 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 NPDC1Q9NQX5 325 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 RLIMQ9NVW2 624 aa12.8□□□□□ -0.36
HDDC2-206ENST00000608461 INTS1Q8N201 2190 aaKnown RBP12.8□□□□□ -0.36
HDDC2-206ENST00000608461 LOC100653049A0A140TA62 436 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 ADAM11O75078 769 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 SS18L1O75177 396 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 KRT34O76011 436 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 CD8BP10966 210 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 KIR2DL2P43627 348 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 MTPNP58546 118 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 SORDQ00796 357 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 SF3A3Q12874 501 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF239Q16600 458 aaKnown RBP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 REP15Q6BDI9 236 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 ZNF787Q6DD87 383 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 MEX3BQ6ZN04 569 aaKnown RBP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 ARPINQ7Z6K5 226 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
HDDC2-206ENST00000608461 ADGRG3Q86Y34 549 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 PTOV1Q86YD1 416 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 GCNT2Q8N0V5 402 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 RASSF5Q8WWW0 418 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 ECSITQ9BQ95 431 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 COQ10BQ9H8M1 238 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 CTPS2Q9NRF8 586 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 KLHL28Q9NXS3 571 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 KCNN3Q9UGI6 736 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 TRAPPC4Q9Y296 219 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 EMC9Q9Y3B6 208 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 CHST2Q9Y4C5 530 aa12.79□□□□□ -0.36
HDDC2-206ENST00000608461 A8MXE2 369 aa12.78□□□□□ -0.36
HDDC2-206ENST00000608461 EEF1E1-BLOC1S5C9J1V9 151 aa12.78□□□□□ -0.36
HDDC2-206ENST00000608461 FXYD1O00168 92 aa12.78□□□□□ -0.36
HDDC2-206ENST00000608461 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
HDDC2-206ENST00000608461 EEF1E1O43324 174 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms