RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 TRIM8Q9BZR9 551 aa15.11■□□□□ 0.01
TRIM28-215ENST00000601150 NSRP1Q9H0G5 558 aaKnown RBP15.11■□□□□ 0.01
TRIM28-215ENST00000601150 PIGMQ9H3S5 423 aa15.11■□□□□ 0.01
TRIM28-215ENST00000601150 JKAMPQ9P055 326 aa15.11■□□□□ 0.01
TRIM28-215ENST00000601150 FOXD3Q9UJU5 478 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-215ENST00000601150 PRDM4Q9UKN5 801 aa15.11■□□□□ 0.01
TRIM28-215ENST00000601150 SPIN1Q9Y657 262 aaPredicted RBP15.11■□□□□ 0.01
TRIM28-215ENST00000601150 PKDREJQ9NTG1 2253 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 MRASO14807 208 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 NPPAP01160 153 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 UQCRC1P31930 480 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 LSP1P33241 339 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 HTR3AP46098 478 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 RBBP4Q09028 425 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 SELPLGQ14242 412 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 CAPRIN1Q14444 709 aaKnown RBP15.1■□□□□ 0.01
TRIM28-215ENST00000601150 ADRM1Q16186 407 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 CYP51A1Q16850 503 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 REP15Q6BDI9 236 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 ZNF550Q7Z398 422 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 DMRTC2Q8IXT2 367 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-215ENST00000601150 CNEP1R1Q8N9A8 125 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 C11orf65Q8NCR3 313 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 HIPK4Q8NE63 616 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 CPNE4Q96A23 557 aaPredicted RBP15.1■□□□□ 0.01
TRIM28-215ENST00000601150 SPATA5L1Q9BVQ7 753 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 COQ10BQ9H8M1 238 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 CTPS2Q9NRF8 586 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 ARMCX1Q9P291 453 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 PACSIN3Q9UKS6 424 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 CELSR2Q9HCU4 2923 aa15.1■□□□□ 0.01
TRIM28-215ENST00000601150 LOC100653049A0A140TA62 436 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 GMNCA6NCL1 334 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 KRT34O76011 436 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 GKN3PP0CG01 181 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 PRKAR1BP31321 381 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 SLC1A3P43003 542 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 POLR2HP52434 150 aaKnown RBP15.09■□□□□ 0.01
TRIM28-215ENST00000601150 GYS2P54840 703 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 ZNF239Q16600 458 aaKnown RBP15.09■□□□□ 0.01
TRIM28-215ENST00000601150 CPLX4Q7Z7G2 160 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 PTOV1Q86YD1 416 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 MCEMP1Q8IX19 187 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 PCYOX1LQ8NBM8 494 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 SLC35B4Q969S0 331 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 LRRC58Q96CX6 371 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 REXO5Q96IC2 774 aaKnown RBP15.09■□□□□ 0.01
TRIM28-215ENST00000601150 OR5B2Q96R09 309 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 ZNF607Q96SK3 696 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 SH3GL1Q99961 368 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 SRXN1Q9BYN0 137 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 FAM107BQ9H098 131 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 KAT8Q9H7Z6 458 aaKnown RBP15.09■□□□□ 0.01
TRIM28-215ENST00000601150 SLC24A3Q9HC58 644 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 GID8Q9NWU2 228 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 CHRNA9Q9UGM1 479 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 ANGPT4Q9Y264 503 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 CHST2Q9Y4C5 530 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 CACNA1DQ01668 2161 aa15.09■□□□□ 0.01
TRIM28-215ENST00000601150 TMED7-TICAM2A0A0A6YYA0 188 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 A0A1W2PNR3 127 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 PLGP00747 810 aaPredicted RBP15.08■□□□□ 0
TRIM28-215ENST00000601150 TFPIP10646 304 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 DRD4P21917 467 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 FKBP2P26885 142 aaKnown RBP15.08■□□□□ 0
TRIM28-215ENST00000601150 TACR3P29371 465 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 PEX19P40855 299 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 ACAA2P42765 397 aaKnown RBP15.08■□□□□ 0
TRIM28-215ENST00000601150 KIR2DL2P43627 348 aaPredicted RBP15.08■□□□□ 0
TRIM28-215ENST00000601150 RAC3P60763 192 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 COPZ1P61923 177 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 GNGT1P63211 74 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 SIRPAP78324 504 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 GUSBP1Q15486 140 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 SYT14P1Q58G82 188 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 GTF2IRD2BQ6EKJ0 949 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 NANOGP8Q6NSW7 305 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 VWA1Q6PCB0 445 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 DHRS4L2Q6PKH6 230 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 FAM214BQ7L5A3 538 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 NET1Q7Z628 596 aaPredicted RBP15.08■□□□□ 0
TRIM28-215ENST00000601150 BTLAQ7Z6A9 289 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 LUZP2Q86TE4 346 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 SERPINA11Q86U17 422 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 GTF2IRD2Q86UP8 949 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 ADGRG3Q86Y34 549 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 SLC30A8Q8IWU4 369 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 ROBO4Q8WZ75 1007 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 STARD4Q96DR4 205 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 GMPPAQ96IJ6 420 aaPredicted RBP15.08■□□□□ 0
TRIM28-215ENST00000601150 SLC39A3Q9BRY0 314 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 NANOGQ9H9S0 305 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 GLRX2Q9NS18 164 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 TMED7Q9Y3B3 224 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 EMC9Q9Y3B6 208 aa15.08■□□□□ 0
TRIM28-215ENST00000601150 PRORSD1PA6NEY8 169 aa15.07■□□□□ 0
TRIM28-215ENST00000601150 FXYD1O00168 92 aa15.07■□□□□ 0
TRIM28-215ENST00000601150 MSTNO14793 375 aa15.07■□□□□ 0
TRIM28-215ENST00000601150 SS18L1O75177 396 aaPredicted RBP15.07■□□□□ 0
TRIM28-215ENST00000601150 SERPINB7O75635 380 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms