RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 NME2P22392 152 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 TACR3P29371 465 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 IFNGR2P38484 337 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 RBM34P42696 430 aaKnown RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 DAPP51397 102 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 POLR2HP52434 150 aaKnown RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 UGT2B15P54855 530 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 PLPPR5Q32ZL2 321 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 ELOA3BQ3SY89 546 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 SLC25A25Q6KCM7 469 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 PGBD2Q6P3X8 592 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 BORAQ6PGQ7 559 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 MBOAT2Q6ZWT7 520 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 ELOA3Q8NG57 546 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 PIGXQ8TBF5 258 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 ZCCHC14Q8WYQ9 949 aaKnown RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 FEVQ99581 238 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 FAM173AQ9BQD7 235 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 ZNF426Q9BUY5 554 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 ADAM19Q9H013 955 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 KRCC1Q9NPI7 259 aaPredicted RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 KLHL1Q9NR64 748 aa13.31□□□□□ -0.28
VRK3-212ENST00000596814 TUBA8Q9NY65 449 aaPredicted RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 PCDHGA9Q9Y5G4 932 aaKnown RBP13.31□□□□□ -0.28
VRK3-212ENST00000596814 LRRC3CA6NJW4 275 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 ADAP00813 363 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 CBLP22681 906 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 IGFBP5P24593 272 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 HTR3AP46098 478 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 TNFSF10P50591 281 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 DLX5P56178 289 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
VRK3-212ENST00000596814 FOXF1Q12946 379 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 KDM4DQ6B0I6 523 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 TTC33Q6PID6 262 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 LINC00114Q6XXX2 140 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 NRMQ8IXM6 262 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 OR2M7Q8NG81 312 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 TM9SF4Q92544 642 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 GNRHR2Q96P88 292 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 ZNF184Q99676 751 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 ZNF556Q9HAH1 456 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 TMEFF2Q9UIK5 374 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 OSGIN1Q9UJX0 560 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 DKKL1Q9UK85 242 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 MGAT4BQ9UQ53 548 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 MED31Q9Y3C7 131 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 ORC6Q9Y5N6 252 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 MPDZO75970 2070 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 A0A087WV48 116 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 A0A087WZY1 265 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 PINLYPA6NC86 204 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 H0YJX3 145 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 ETV2O00321 342 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 KPNA4O00629 521 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 PIP5K1CO60331 668 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 CBR3O75828 277 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 GASTP01350 101 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 DSCR4P56555 118 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 MERTKQ12866 999 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 ZNF766Q5HY98 468 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 GALNTL5Q7Z4T8 443 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 LSRQ86X29 649 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 SULF2Q8IWU5 870 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 RNF113BQ8IZP6 322 aaKnown RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 TMEM178AQ8NBL3 297 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 PFN4Q8NHR9 129 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 GTPBP3Q969Y2 492 aaKnown RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 DTNBP1Q96EV8 351 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 SCMH1Q96GD3 660 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 MRGPRX4Q96LA9 322 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 NIPSNAP1Q9BPW8 284 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 ZFP64Q9NPA5 681 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 KRT84Q9NSB2 600 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 SMPD3Q9NY59 655 aaPredicted RBP13.3□□□□□ -0.28
VRK3-212ENST00000596814 C15orf41Q9Y2V0 281 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 PCDHGB6Q9Y5F9 930 aa13.3□□□□□ -0.28
VRK3-212ENST00000596814 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 TAF4O00268 1085 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 POU2F1P14859 743 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 CXCR1P25024 350 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 DPP4P27487 766 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 RAD23AP54725 363 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 IL1RL1Q01638 556 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 FOXO1Q12778 655 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 SLC25A53Q5H9E4 307 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 C1orf94Q6P1W5 598 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 ZER1Q7Z7L7 766 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 DNAJC9Q8WXX5 260 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 ZBTB8AQ96BR9 441 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 FAM46AQ96IP4 442 aaKnown RBP13.29□□□□□ -0.28
VRK3-212ENST00000596814 RDH12Q96NR8 316 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 TMEM43Q9BTV4 400 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
VRK3-212ENST00000596814 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
VRK3-212ENST00000596814 TMEM5Q9Y2B1 443 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms