RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TRMT5Q32P41 509 aaKnown RBP10.32□□□□□ -0.76
VMP1-211ENST00000591315 ZNF311Q5JNZ3 666 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 NANOGP8Q6NSW7 305 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 REEP3Q6NUK4 255 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ESPNLQ6ZVH7 1005 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 BTLAQ7Z6A9 289 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ADGRG3Q86Y34 549 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 CMIPQ8IY22 773 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ZZZ3Q8IYH5 903 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ZNF295-AS1Q8N0V1 137 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ACBD4Q8NC06 268 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 OR10A6Q8NH74 314 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ZNF563Q8TA94 476 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 BBS10Q8TAM1 723 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 ST8SIA1Q92185 356 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 LRRC58Q96CX6 371 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 KAT8Q9H7Z6 458 aaKnown RBP10.32□□□□□ -0.76
VMP1-211ENST00000591315 NANOGQ9H9S0 305 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 RNF122Q9H9V4 155 aa10.32□□□□□ -0.76
VMP1-211ENST00000591315 EXOSC3Q9NQT5 275 aaKnown RBP10.32□□□□□ -0.76
VMP1-211ENST00000591315 TMED7-TICAM2A0A0A6YYA0 188 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 TMEM72A0PK05 275 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ZC3H12DA2A288 527 aaKnown RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 TMEM247A6NEH6 219 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 CFAP73A6NFT4 308 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 EEF1E1-BLOC1S5C9J1V9 151 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 DVL2O14641 736 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 EEF1E1O43324 174 aaKnown RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 SNX3O60493 162 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 THBS1P07996 1170 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 PABPC4LP0CB38 370 aaKnown RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 COX4I1P13073 169 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ENPP1P22413 925 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ME2P23368 584 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ADH6P28332 368 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 TACR3P29371 465 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 UQCRC1P31930 480 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 CARD18P57730 90 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 EEFSECP57772 596 aaKnown RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 DMTNQ08495 405 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 BNIP2Q12982 314 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 SELENBP1Q13228 472 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 LARS2Q15031 903 aaKnown RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 CYP51A1Q16850 503 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 SLC25A35Q3KQZ1 300 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 MMEL1Q495T6 779 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 LIN52Q52LA3 116 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 LUZP2Q86TE4 346 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 CADM2Q8N3J6 435 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 CNEP1R1Q8N9A8 125 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 SMYD1Q8NB12 490 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 OIT3Q8WWZ8 545 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 STARD4Q96DR4 205 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ARL5BQ96KC2 179 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 OR5B2Q96R09 309 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 SPATA9Q9BWV2 254 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ENKD1Q9H0I2 346 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 MYLK2Q9H1R3 596 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 OPN3Q9H1Y3 402 aaPredicted RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 TMEM38AQ9H6F2 299 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 CHST11Q9NPF2 352 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 THUMPD1Q9NXG2 353 aaKnown RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 JKAMPQ9P055 326 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ZNF629Q9UEG4 869 aaPredicted RBP10.31□□□□□ -0.76
VMP1-211ENST00000591315 OSGIN1Q9UJX0 560 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 TMED7Q9Y3B3 224 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ZNF175Q9Y473 711 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 ALPK2Q86TB3 2170 aa10.31□□□□□ -0.76
VMP1-211ENST00000591315 CCT8L1PA6NM43 557 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 AIM2O14862 343 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 HNRNPRO43390 633 aaKnown RBP10.3□□□□□ -0.76
VMP1-211ENST00000591315 IL18BPO95998 194 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 OPN1SWP03999 348 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 TFPIP10646 304 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 COX6B1P14854 86 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 ETS2P15036 469 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 SLC6A2P23975 617 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 HTR2AP28223 471 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 OPRM1P35372 400 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 ASCL1P50553 236 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 CRYBA2P53672 197 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 PCBP3P57721 371 aaKnown RBP10.3□□□□□ -0.76
VMP1-211ENST00000591315 CYLC2Q14093 348 aaPredicted RBP10.3□□□□□ -0.76
VMP1-211ENST00000591315 GNA13Q14344 377 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 GUSBP1Q15486 140 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 ZNF239Q16600 458 aaKnown RBP10.3□□□□□ -0.76
VMP1-211ENST00000591315 RNF220Q5VTB9 566 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 PRAMEF8Q5VWM4 474 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 PRAMEF7Q5VXH5 474 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 GRINAQ7Z429 371 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 NET1Q7Z628 596 aaPredicted RBP10.3□□□□□ -0.76
VMP1-211ENST00000591315 CPLX4Q7Z7G2 160 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 CALHM3Q86XJ0 350 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 C11orf65Q8NCR3 313 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 GPR32P1Q8NGA4 272 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 ABHD3Q8WU67 409 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 TMEM234Q8WY98 164 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 PMM1Q92871 262 aa10.3□□□□□ -0.76
VMP1-211ENST00000591315 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
VMP1-211ENST00000591315 PRRG4Q9BZD6 226 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms