RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 DPP10Q8N608 796 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 CPNE4Q96A23 557 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 REXO5Q96IC2 774 aaKnown RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 GMPPAQ96IJ6 420 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 CCDC106Q9BWC9 280 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 SRXN1Q9BYN0 137 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 IKZF5Q9H5V7 419 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 BCL2L10Q9HD36 194 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 CTPS2Q9NRF8 586 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 SERINC1Q9NRX5 453 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 MRGBPQ9NV56 204 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 GALNT8Q9NY28 637 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 CORO2BQ9UQ03 480 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF443Q9Y2A4 671 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 IFT52Q9Y366 437 aa8.23□□□□□ -1.09
DNMT1-223ENST00000591239 HRNRQ86YZ3 2850 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-223ENST00000591239 OTOGQ6ZRI0 2925 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 A0A1W2PNR3 127 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CFAP73A6NFT4 308 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 C5orf58C9J3I9 102 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 FAAHO00519 579 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 PGM3O95394 542 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CGAP01215 116 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 THBS1P07996 1170 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 PABPC4LP0CB38 370 aaKnown RBP8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GKN3PP0CG01 181 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ARAFP10398 606 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GPX2P18283 190 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 HTR3AP46098 478 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 RAC3P60763 192 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 SORDQ00796 357 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 EPS8Q12929 822 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF239Q16600 458 aaKnown RBP8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ZSWIM7Q19AV6 140 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 SYT14P1Q58G82 188 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 RUNDC3AQ59EK9 446 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GCNT6Q5T4J0 391 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 RNF220Q5VTB9 566 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GTF2IRD2BQ6EKJ0 949 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 REEP3Q6NUK4 255 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF836Q6ZNA1 936 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GRINAQ7Z429 371 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 DHDDSQ86SQ9 333 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GTF2IRD2Q86UP8 949 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ADGRG3Q86Y34 549 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF440Q8IYI8 595 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CLIP4Q8N3C7 705 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 NFKBIDQ8NI38 313 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 BBS10Q8TAM1 723 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 SLC25A43Q8WUT9 341 aaPredicted RBP8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ROBO4Q8WZ75 1007 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF317Q96PQ6 595 aaPredicted RBP8.22□□□□□ -1.09
DNMT1-223ENST00000591239 OR5B2Q96R09 309 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CGREF1Q99674 301 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ZNF559Q9BR84 538 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CPPED1Q9BRF8 314 aaPredicted RBP8.22□□□□□ -1.09
DNMT1-223ENST00000591239 TMEM38AQ9H6F2 299 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 ARMC7Q9H6L4 198 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 COQ10BQ9H8M1 238 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CACYBPQ9HB71 228 aaKnown RBP8.22□□□□□ -1.09
DNMT1-223ENST00000591239 MCCC2Q9HCC0 563 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 SAR1AQ9NR31 198 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 GLRX2Q9NS18 164 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 KLHL14Q9P2G3 628 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CHRNA9Q9UGM1 479 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 CLEC4AQ9UMR7 237 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 EMC9Q9Y3B6 208 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 AKAP9Q99996 3911 aa8.22□□□□□ -1.09
DNMT1-223ENST00000591239 POLQO75417 2590 aa8.21□□□□□ -1.09
DNMT1-223ENST00000591239 TUBAL3A6NHL2 446 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 FBP2O00757 339 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 SS18L1O75177 396 aaPredicted RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 TFPIP10646 304 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 CD8BP10966 210 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 UQCRBP14927 111 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ETS2P15036 469 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ENPP1P22413 925 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 SLC6A2P23975 617 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 FKBP2P26885 142 aaKnown RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 CPOXP36551 454 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ACAA2P42765 397 aaKnown RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 SLC1A3P43003 542 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 DIO1P49895 249 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 POLR2HP52434 150 aaKnown RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 CTBP2P56545 445 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 CDK6Q00534 326 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 KLF10Q13118 480 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 NFYCQ13952 458 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 RNPS1Q15287 305 aaKnown RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ADRM1Q16186 407 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF311Q5JNZ3 666 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF474Q6S9Z5 364 aaPredicted RBP8.21□□□□□ -1.1
DNMT1-223ENST00000591239 TMPPEQ6ZT21 453 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 FCRLAQ7L513 359 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ZNF550Q7Z398 422 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 ZZZ3Q8IYH5 903 aa8.21□□□□□ -1.1
DNMT1-223ENST00000591239 SLC43A2Q8N370 569 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms