RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 ADAMTS15Q8TE58 950 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 TWIST2Q8WVJ9 160 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 DYDC1Q8WWB3 177 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 OR5B2Q96R09 309 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 OR7D2Q96RA2 312 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 SDF2Q99470 211 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 C1orf50Q9BV19 199 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 THUMPD3Q9BV44 507 aaKnown RBP10.26□□□□□ -0.77
LIG3-207ENST00000586119 C1QTNF6Q9BXI9 259 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 ACTRT3Q9BYD9 372 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 POTEKPQ9BYX7 375 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 NGBQ9NPG2 151 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 HAO1Q9UJM8 370 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 RAP2CQ9Y3L5 183 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 DTNAQ9Y4J8 743 aa10.26□□□□□ -0.77
LIG3-207ENST00000586119 GPC6Q9Y625 555 aaPredicted RBP10.26□□□□□ -0.77
LIG3-207ENST00000586119 ARFGEF3Q5TH69 2177 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 FAM234BA2RU67 622 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 A8MV72 311 aaPredicted RBP10.25□□□□□ -0.77
LIG3-207ENST00000586119 TLX2O43763 284 aaPredicted RBP10.25□□□□□ -0.77
LIG3-207ENST00000586119 CYTIPO60759 359 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 SLC7A1P30825 629 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 ARRB2P32121 409 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 CCR4P51679 360 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 CDH11P55287 796 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 BST1Q10588 318 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 GPR68Q15743 365 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 ETFDHQ16134 617 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 SLC25A53Q5H9E4 307 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 PODNL1Q6PEZ8 512 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 B3GLCTQ6Y288 498 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 HMGN2P46Q86SG4 172 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 DTX2Q86UW9 622 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 SLC43A2Q8N370 569 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 TMCO5AQ8N6Q1 288 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 ZNF433Q8N7K0 673 aaPredicted RBP10.25□□□□□ -0.77
LIG3-207ENST00000586119 OR10H5Q8NGA6 315 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 OR52N5Q8NH56 324 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 OR5W2Q8NH69 310 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 LRRC8CQ8TDW0 803 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 CKAP2Q8WWK9 683 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 OR5P2Q8WZ92 322 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 MTERF3Q96E29 417 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 MRGPRX4Q96LA9 322 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 MAGEB18Q96M61 343 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 HS6ST2Q96MM7 605 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 CACNG6Q9BXT2 260 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 HOXD1Q9GZZ0 328 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 GP6Q9HCN6 339 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 TRAF6Q9Y4K3 522 aa10.25□□□□□ -0.77
LIG3-207ENST00000586119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.24□□□□□ -0.779e-8■■■■■ 63.4
LIG3-207ENST00000586119 GJE1A6NN92 205 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 SLCO1B7G3V0H7 640 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 ZNF264O43296 627 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 SNNO75324 88 aaPredicted RBP10.24□□□□□ -0.77
LIG3-207ENST00000586119 RAD51DO75771 328 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 LY6HO94772 140 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 PGM3O95394 542 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 C1QCP02747 245 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 FESP07332 822 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 ASMTP46597 345 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 ZNF83P51522 516 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 SUMO3P55854 103 aaPredicted RBP10.24□□□□□ -0.77
LIG3-207ENST00000586119 SESN3P58005 492 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 CHRNEQ04844 493 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 SELENBP1Q13228 472 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 MAPK14Q16539 360 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 SPDYE7PQ495Y7 208 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 IL23RQ5VWK5 629 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 C11orf71Q6IPW1 123 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 R3HCC1LQ7Z5L2 792 aaKnown RBP10.24□□□□□ -0.77
LIG3-207ENST00000586119 ZNF100Q8IYN0 542 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 ARIH2OSQ8N7S6 290 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 PSMA8Q8TAA3 256 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 COQ8BQ96D53 544 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 RHNO1Q9BSD3 238 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 ALG2Q9H553 416 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 HHATLQ9HCP6 504 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 KLHL9Q9P2J3 617 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 MKLN1Q9UL63 735 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 FAF1Q9UNN5 650 aaPredicted RBP10.24□□□□□ -0.77
LIG3-207ENST00000586119 TMED5Q9Y3A6 229 aa10.24□□□□□ -0.77
LIG3-207ENST00000586119 SERINC4A6NH21 518 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 OR5H1A6NKK0 313 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 H3BNH8 94 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 ETV2O00321 342 aaPredicted RBP10.23□□□□□ -0.77
LIG3-207ENST00000586119 CFLARO15519 480 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 PHF1O43189 567 aaPredicted RBP10.23□□□□□ -0.77
LIG3-207ENST00000586119 ITM2AO43736 263 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 EIF4E2O60573 245 aaKnown RBP10.23□□□□□ -0.77
LIG3-207ENST00000586119 UBL4AP11441 157 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 GGT1P19440 569 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 COX5AP20674 150 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 MATN1P21941 496 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 TTKP33981 857 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 DIO1P49895 249 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 RPL14P50914 215 aaKnown RBP10.23□□□□□ -0.77
LIG3-207ENST00000586119 NUDT6P53370 316 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 HBA1P69905 142 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 MERTKQ12866 999 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms