RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NDEL1Q9GZM8 345 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 LAT2Q9GZY6 243 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 LRRN3Q9H3W5 708 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 ZBTB20Q9HC78 741 aaPredicted RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 ATP13A2Q9NQ11 1180 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 MEPEQ9NQ76 525 aaPredicted RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 HINT3Q9NQE9 182 aaKnown RBP10.35□□□□□ -0.75
LIG3-204ENST00000585740 C20orf141Q9NUB4 165 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 NDUFB11Q9NX14 153 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 KLHL21Q9UJP4 597 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 RARRES3Q9UL19 164 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 GPR52Q9Y2T5 361 aa10.35□□□□□ -0.75
LIG3-204ENST00000585740 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 IGLV3-12A0A075B6K2 115 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 A0A1W2PQD3 144 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 CPED1A4D0V7 1026 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 SLC22A31A6NKX4 558 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 PRR23D1E9PI22 279 aaPredicted RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 GTPBP1O00178 669 aaKnown RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 KPNA4O00629 521 aaPredicted RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 ZNF264O43296 627 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 SIGLEC6O43699 453 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 EIF4E2O60573 245 aaKnown RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 NDUFB2O95178 105 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 IGHA1P01876 353 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 CYC1P08574 325 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 SP9P0CG40 484 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 PRR23D2P0DMB1 279 aaPredicted RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 ZNF3P17036 446 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 ATP6V1E1P36543 226 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 FXYD6P3P58550 94 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 CCL7P80098 99 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 CRYZQ08257 329 aaKnown RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 ACSM1Q08AH1 577 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 TPBGQ13641 420 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 EBPQ15125 230 aaKnown RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 NNATQ16517 81 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 HLA-BQ31612 363 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 ANKDD1AQ495B1 522 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 NIPAL3Q6P499 406 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 GUSBP11Q6P575 273 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 TMPRSS11AQ6ZMR5 421 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 GATAD2AQ86YP4 633 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 CPOQ8IVL8 374 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 OR4C3Q8NH37 302 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 CLIP3Q96DZ5 547 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 COQ7Q99807 217 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 TMEM43Q9BTV4 400 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 NUDT9Q9BW91 350 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 VN1R1Q9GZP7 353 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 NXF5Q9H1B4 397 aaKnown RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 CRNNQ9UBG3 495 aaPredicted RBP10.34□□□□□ -0.75
LIG3-204ENST00000585740 TNFRSF10DQ9UBN6 386 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 PEX16Q9Y5Y5 336 aa10.34□□□□□ -0.75
LIG3-204ENST00000585740 ELOA3DA6NLF2 546 aaPredicted RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 TAF4O00268 1085 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 SLC30A4O14863 429 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 AKAP8O43823 692 aaKnown RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 REM1O75628 298 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 GPX5O75715 221 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 OR7A10O76100 309 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 CER1O95813 267 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 ONECUT2O95948 504 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 PEPDP12955 493 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 MYF5P13349 255 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 SDHBP21912 280 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 S100A5P33763 92 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 SLC1A3P43003 542 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 RNF144AP50876 292 aaPredicted RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 PNLIPRP2P54317 469 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 BDH1Q02338 343 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 CSTF1Q05048 431 aaKnown RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 POU4F2Q12837 409 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 INAQ16352 499 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 ISXQ2M1V0 245 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 ELOA3BQ3SY89 546 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 VWA2Q5GFL6 755 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 PERM1Q5SV97 790 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 C1orf189Q5VU69 101 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 NUP54Q7Z3B4 507 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 PHC2Q8IXK0 858 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 SUMF1Q8NBK3 374 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 MINDY2Q8NBR6 621 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 ELOA3Q8NG57 546 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 PHOSPHO1Q8TCT1 267 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 TP53INP1Q96A56 240 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 C3orf49Q96BT1 292 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 EFHD2Q96C19 240 aaPredicted RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 ARHGAP9Q9BRR9 750 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 CENPOQ9BU64 300 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 WWTR1Q9GZV5 400 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 EXOSC4Q9NPD3 245 aaKnown RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 MKL2Q9ULH7 1088 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 SLC6A5Q9Y345 797 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 CAB39Q9Y376 341 aaPredicted RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 ZNF337Q9Y3M9 751 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 SPIN1Q9Y657 262 aaPredicted RBP10.33□□□□□ -0.76
LIG3-204ENST00000585740 PMF1-BGLAPU3KQ54 211 aa10.33□□□□□ -0.76
LIG3-204ENST00000585740 GPR179Q6PRD1 2367 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms