RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NT5EP21589 574 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DRD5P21918 477 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 STOMP27105 288 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MMP15P51511 669 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 P2RX3P56373 397 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PRICKLE4Q2TBC4 344 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FCRL6Q6DN72 434 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TBC1D3CQ6IPX1 549 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LYPD4Q6UWN0 246 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TBC1D3Q8IZP1 549 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TOMM5Q8N4H5 51 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CAMKVQ8NCB2 501 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR11H7Q8NGC8 314 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR13C5Q8NGS8 318 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 HAVCR2Q8TDQ0 301 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GRHL3Q8TE85 626 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR1E3Q8WZA6 343 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CITED4Q96RK1 184 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF426Q9BUY5 554 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PLA2G2FQ9BZM2 168 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TWSG1Q9GZX9 223 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 STMN3Q9NZ72 180 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ING4Q9UNL4 249 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LOC105369274A0A096LPK9 316 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MYOGP15173 224 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 UGT2B7P16662 529 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FHL1Q13642 323 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TMEFF1Q8IYR6 380 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR4N4Q8N0Y3 316 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BMPERQ8N8U9 685 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TMEM52Q8NDY8 209 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TNFRSF13CQ96RJ3 184 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 IL21RQ9HBE5 538 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 EMC7Q9NPA0 242 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MAT2BQ9NZL9 334 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ABRACLQ9P1F3 81 aa13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MRPS2Q9Y399 296 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TRBV23OR9-2A0A075B6M9 112 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GPR75O95800 540 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SERPINA3P01011 423 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CD3GP09693 182 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 EPXP11678 715 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ATF1P18846 271 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GABRA3P34903 492 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR3A3P47888 321 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 POU6F2P78424 691 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MGAT2Q10469 447 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FIGLAQ6QHK4 219 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZAR1Q86SH2 424 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RFLNBQ8N5W9 214 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CCL4L1Q8NHW4 92 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ANGPTL6Q8NI99 470 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RANBP3Q9H6Z4 567 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MCCC2Q9HCC0 563 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLCO1C1Q9NYB5 712 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 COPZ2Q9P299 210 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TEX13CA0A0J9YWL9 993 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SYNDIG1LA6NDD5 238 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CYR61O00622 381 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OGG1O15527 345 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 IFNGP01579 166 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC6A6P31641 620 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 KIR2DL1P43626 348 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SEC13P55735 322 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PITPNAQ00169 270 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ENPP7Q6UWV6 458 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SIAH3Q8IW03 269 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 YAF2Q8IY57 180 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC43A2Q8N370 569 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF655Q8N720 491 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR4D9Q8NGE8 314 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 THAP4Q8WY91 577 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CNOT9Q92600 299 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SMIM19Q96E16 107 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GPR137Q96N19 417 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR2M2Q96R28 347 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SERTAD3Q9UJW9 196 aa13.09□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A0A1B0GWA3 101 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NGFRP08138 427 aa13.08□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HOXC4P09017 264 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms