RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 OIT3Q8WWZ8 545 aa12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CNOT9Q92600 299 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 S100PBPQ96BU1 408 aa12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 MAELQ96JY0 434 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CTPS2Q9NRF8 586 aa12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SLC6A13Q9NSD5 602 aa12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GPR52Q9Y2T5 361 aa12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SPIN1Q9Y657 262 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 USH1CQ9Y6N9 552 aa12.12□□□□□ -0.47
CDK5RAP3-233ENST00000584186 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 AP3D1O14617 1153 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 KLF11O14901 512 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CYTIPO60759 359 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ADAP00813 363 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 IL7RP16871 459 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 PSMB1P20618 241 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 IL32P24001 234 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CRATP43155 626 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 POLR2JP52435 117 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CSNK2A1P68400 391 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GNA13Q14344 377 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ACKR1Q16570 336 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GSTA3Q16772 222 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 BEX5Q5H9J7 111 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 C6orf10Q5SRN2 563 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 AGBL2Q5U5Z8 902 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 TMPPEQ6ZT21 453 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 MIER2Q8N344 545 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 STEAP2Q8NFT2 490 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 OR9I1Q8NGQ6 314 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SLC25A43Q8WUT9 341 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 WDR60Q8WVS4 1066 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 VPS33AQ96AX1 596 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZNF300Q96RE9 604 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CCL19Q99731 98 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 PSD2Q9BQI7 771 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 TACO1Q9BSH4 297 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CCDC106Q9BWC9 280 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 HDHD5Q9BXW7 423 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SLC38A1Q9H2H9 487 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 RMND5AQ9H871 391 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 MTHFD2LQ9H903 347 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 EXOSC3Q9NQT5 275 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SDR39U1Q9NRG7 319 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZIM2Q9NZV7 527 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CHRNA9Q9UGM1 479 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 HEATR5AQ86XA9 2040 aa12.11□□□□□ -0.47
CDK5RAP3-233ENST00000584186 NF1P21359 2839 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZNF469Q96JG9 3925 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 KLF4O43474 513 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SMPD2O60906 423 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ADAM11O75078 769 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 DBIP07108 87 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ETFAP13804 333 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 FPR1P21462 350 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 LOXP28300 417 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 TXNL4AP83876 142 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 PLAURQ03405 335 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 CAPRIN1Q14444 709 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GTDC1Q4AE62 458 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SFRP5Q5T4F7 317 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 AP1ARQ63HQ0 302 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GRINAQ7Z429 371 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 P3H2Q8IVL5 708 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GABRG1Q8N1C3 465 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 PIGTQ969N2 578 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 AURKBQ96GD4 344 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ITCHQ96J02 903 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 OR11A1Q9GZK7 315 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 P2RX2Q9UBL9 471 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 PRSS50Q9UI38 385 aa12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ING1Q9UK53 422 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 SETD2Q9BYW2 2564 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZNF814B7Z6K7 855 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 BCHEP06276 602 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 UQCRBP14927 111 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 OR2B6P58173 313 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 DSTNP60981 165 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 STX1BP61266 288 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 MRPL2Q5T653 305 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 EPGNQ6UW88 154 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ZNF704Q6ZNC4 412 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 MTDHQ86UE4 582 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-233ENST00000584186 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms