RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 TMEM249Q2WGJ8 235 aa12□□□□□ -0.49
SS18-222ENST00000582792 LSM12Q3MHD2 195 aaKnown RBP12□□□□□ -0.49
SS18-222ENST00000582792 TMEM176BQ3YBM2 270 aaPredicted RBP12□□□□□ -0.49
SS18-222ENST00000582792 EXOSC6Q5RKV6 272 aaKnown RBP12□□□□□ -0.49
SS18-222ENST00000582792 CCNJQ5T5M9 372 aa12□□□□□ -0.49
SS18-222ENST00000582792 AGAP6Q5VW22 663 aa12□□□□□ -0.49
SS18-222ENST00000582792 ZCCHC12Q6PEW1 402 aa12□□□□□ -0.49
SS18-222ENST00000582792 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
SS18-222ENST00000582792 COX18Q8N8Q8 333 aa12□□□□□ -0.49
SS18-222ENST00000582792 FBXO27Q8NI29 283 aa12□□□□□ -0.49
SS18-222ENST00000582792 ZFP90Q8TF47 636 aa12□□□□□ -0.49
SS18-222ENST00000582792 PPCDCQ96CD2 204 aa12□□□□□ -0.49
SS18-222ENST00000582792 COQ8BQ96D53 544 aa12□□□□□ -0.49
SS18-222ENST00000582792 C16orf58Q96GQ5 468 aa12□□□□□ -0.49
SS18-222ENST00000582792 PPP1R36Q96LQ0 422 aa12□□□□□ -0.49
SS18-222ENST00000582792 ADAD1Q96M93 576 aaKnown RBP12□□□□□ -0.49
SS18-222ENST00000582792 ZNF317Q96PQ6 595 aaPredicted RBP12□□□□□ -0.49
SS18-222ENST00000582792 PSD2Q9BQI7 771 aa12□□□□□ -0.49
SS18-222ENST00000582792 CXorf36Q9H7Y0 433 aa12□□□□□ -0.49
SS18-222ENST00000582792 BCO1Q9HAY6 547 aa12□□□□□ -0.49
SS18-222ENST00000582792 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
SS18-222ENST00000582792 ACSS1Q9NUB1 689 aaPredicted RBP12□□□□□ -0.49
SS18-222ENST00000582792 ATAD3AQ9NVI7 634 aa12□□□□□ -0.49
SS18-222ENST00000582792 TMEM45AQ9NWC5 275 aa12□□□□□ -0.49
SS18-222ENST00000582792 TMEM160Q9NX00 188 aa12□□□□□ -0.49
SS18-222ENST00000582792 KLHL9Q9P2J3 617 aa12□□□□□ -0.49
SS18-222ENST00000582792 BAIAP2L1Q9UHR4 511 aa12□□□□□ -0.49
SS18-222ENST00000582792 ING1Q9UK53 422 aaPredicted RBP12□□□□□ -0.49
SS18-222ENST00000582792 GPC6Q9Y625 555 aaPredicted RBP12□□□□□ -0.49
SS18-222ENST00000582792 GOLGA8QA0A0J9YX86 632 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 FAM234BA2RU67 622 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 GOLGA8OA6NCC3 632 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 GOLGA8NF8WBI6 632 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 ABCD4O14678 606 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 ANKRD28O15084 1053 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 POLR3GO15318 223 aaPredicted RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 NUDT14O95848 222 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 C8BP07358 591 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 VIMP08670 466 aaKnown RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 ALDOCP09972 364 aaKnown RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 ENPP1P22413 925 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 P2RX1P51575 399 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 SUMO3P55854 103 aaPredicted RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 DSCR9P59020 149 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 POU6F2P78424 691 aaPredicted RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 VLDLRP98155 873 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 LOXL1Q08397 574 aaPredicted RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 PTGR1Q14914 329 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 PDCD4Q53EL6 469 aaKnown RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 TIMM23BQ5SRD1 257 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 NXNQ6DKJ4 435 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 CLEC2AQ6UVW9 174 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 CBLN3Q6UW01 205 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 SSX8Q7RTT4 187 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 GLB1L3Q8NCI6 653 aaPredicted RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 PHOSPHO1Q8TCT1 267 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 TESCQ96BS2 214 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 OTUB1Q96FW1 271 aaPredicted RBP11.99□□□□□ -0.49
SS18-222ENST00000582792 OR52B2Q96RD2 323 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 TNFRSF13CQ96RJ3 184 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 BTBD2Q9BX70 525 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 DPY30Q9C005 99 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 ZIM2Q9NZV7 527 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 PRSS50Q9UI38 385 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 ICAM5Q9UMF0 924 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 GPR45Q9Y5Y3 372 aa11.99□□□□□ -0.49
SS18-222ENST00000582792 ALPK2Q86TB3 2170 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 IGHV3-15A0A0B4J1V0 119 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 ELOA3DA6NLF2 546 aaPredicted RBP11.98□□□□□ -0.49
SS18-222ENST00000582792 UBDO15205 165 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 OIP5O43482 229 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 AKAP10O43572 662 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 PRKCAP17252 672 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 COX5AP20674 150 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 PTNP21246 168 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 ATP4BP51164 291 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 RAC3P60763 192 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 KRTAP24-1Q3LI83 254 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 ELOA3BQ3SY89 546 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 KLHL26Q53HC5 615 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 METTL21CQ5VZV1 264 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 C11orf71Q6IPW1 123 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 P2RY8Q86VZ1 359 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 ATP6V1C2Q8NEY4 427 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 ELOA3Q8NG57 546 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 OR8J2Q8NGG1 315 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 CLHC1Q8NHS4 586 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 JADE3Q92613 823 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 RADILQ96JH8 1075 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 MRGPRX4Q96LA9 322 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 CACNG6Q9BXT2 260 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 BEX2Q9BXY8 128 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 BHLHE41Q9C0J9 482 aaPredicted RBP11.98□□□□□ -0.49
SS18-222ENST00000582792 SDR39U1Q9NRG7 319 aaPredicted RBP11.98□□□□□ -0.49
SS18-222ENST00000582792 DUSP22Q9NRW4 184 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 MRGBPQ9NV56 204 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 FGFR1OP2Q9NVK5 253 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 NPAP1Q9NZP6 1156 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms