RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 SULT2B1O00204 365 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CLIC1O00299 241 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 NR5A2O00482 541 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 FAAHO00519 579 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 DNPH1O43598 174 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
NDE1-211ENST00000576502 BCHEP06276 602 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CHRM4P08173 479 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CD1EP15812 388 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 RPS4Y1P22090 263 aaKnown RBP12.36□□□□□ -0.43
NDE1-211ENST00000576502 AGTR1P30556 359 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 COPZ1P61923 177 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 EXOC3L2Q2M3D2 409 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 HSP90B2PQ58FF3 399 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 COX20Q5RI15 118 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
NDE1-211ENST00000576502 OLIG3Q7RTU3 272 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 ZNF550Q7Z398 422 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CDC20BQ86Y33 519 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 ZNF610Q8N9Z0 462 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 OR52P1PQ8NH57 321 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 ROBO4Q8WZ75 1007 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 GTF2H4Q92759 462 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 EBF4Q9BQW3 602 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 KLHL4Q9C0H6 718 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 COQ10BQ9H8M1 238 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CCDC167Q9P0B6 97 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 EMC3Q9P0I2 261 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 CLEC4AQ9UMR7 237 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 IFT52Q9Y366 437 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 HDGFL3Q9Y3E1 203 aa12.36□□□□□ -0.43
NDE1-211ENST00000576502 A0A1W2PNR3 127 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 PRAMEF27A3QJZ7 478 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 EVPLLA8MZ36 301 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 EFNA2O43921 213 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 YES1P07947 543 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 THBS1P07996 1170 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 ETFAP13804 333 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 SHC1P29353 583 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 DNAJA1P31689 397 aaKnown RBP12.35□□□□□ -0.43
NDE1-211ENST00000576502 IDH2P48735 452 aaKnown RBP12.35□□□□□ -0.43
NDE1-211ENST00000576502 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
NDE1-211ENST00000576502 AGKQ53H12 422 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 MRPL2Q5T653 305 aaKnown RBP12.35□□□□□ -0.43
NDE1-211ENST00000576502 TMPPEQ6ZT21 453 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 BBS10Q8TAM1 723 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 ABHD3Q8WU67 409 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 SLC38A5Q8WUX1 472 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 DDIT4LQ96D03 193 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 ZG16BQ96DA0 208 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 USB1Q9BQ65 265 aaKnown RBP12.35□□□□□ -0.43
NDE1-211ENST00000576502 KLHDC3Q9BQ90 382 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 CCDC106Q9BWC9 280 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 HDHD5Q9BXW7 423 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 SRXN1Q9BYN0 137 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 QRSL1Q9H0R6 528 aaKnown RBP12.35□□□□□ -0.43
NDE1-211ENST00000576502 OR10A4Q9H209 315 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 ST6GALNAC2Q9UJ37 374 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 GPR52Q9Y2T5 361 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 PCDHB14Q9Y5E9 798 aa12.35□□□□□ -0.43
NDE1-211ENST00000576502 ZNF208O43345 1280 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 PMS2P2O95744 297 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 TFPTP0C1Z6 253 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 NCF2P19878 526 aaPredicted RBP12.34□□□□□ -0.43
NDE1-211ENST00000576502 SLC1A3P43003 542 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 DIO1P49895 249 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 RASGEF1BQ0VAM2 473 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 RGNQ15493 299 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 LRIF1Q5T3J3 769 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 RNF220Q5VTB9 566 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 SLC2A7Q6PXP3 512 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 KRT73Q86Y46 540 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 STEAP2Q8NFT2 490 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 PIGXQ8TBF5 258 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 CNOT9Q92600 299 aaKnown RBP12.34□□□□□ -0.43
NDE1-211ENST00000576502 SLC35B4Q969S0 331 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 AURKBQ96GD4 344 aaPredicted RBP12.34□□□□□ -0.43
NDE1-211ENST00000576502 TMEM19Q96HH6 336 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 SPATA5L1Q9BVQ7 753 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 PAIP1Q9H074 479 aaKnown RBP12.34□□□□□ -0.43
NDE1-211ENST00000576502 C12orf49Q9H741 205 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 BCO1Q9HAY6 547 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 A4GALTQ9NPC4 353 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 CTPS2Q9NRF8 586 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 SLC6A13Q9NSD5 602 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 KLHL28Q9NXS3 571 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 DSPPQ9NZW4 1301 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 TACC2O95359 2948 aa12.34□□□□□ -0.43
NDE1-211ENST00000576502 TMED7-TICAM2A0A0A6YYA0 188 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 A0A1W2PP18 115 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 ZNF724A8MTY0 619 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 GPR171O14626 319 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 ANGPT2O15123 496 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 EIF1BO60739 113 aaKnown RBP12.33□□□□□ -0.44
NDE1-211ENST00000576502 CYTIPO60759 359 aa12.33□□□□□ -0.44
NDE1-211ENST00000576502 EDF1O60869 148 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms