RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SORDQ00796 357 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 AGERQ15109 404 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 DECR1Q16698 335 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 HFEQ30201 348 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 ZNF805Q5CZA5 627 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 PRAMEF13Q5VWM6 474 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 MBOAT2Q6ZWT7 520 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 ZNF433Q8N7K0 673 aaPredicted RBP13.34□□□□□ -0.27
SMG6-215ENST00000574501 STK35Q8TDR2 534 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 BCL7CQ8WUZ0 217 aaPredicted RBP13.34□□□□□ -0.27
SMG6-215ENST00000574501 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 SCLYQ96I15 445 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 MCHR1Q99705 422 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 PLEKHA1Q9HB21 404 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 PRDM9Q9NQV7 894 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 NDRG3Q9UGV2 375 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 SLC7A7Q9UM01 511 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 XIRP2A4UGR9 3374 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 HTTP42858 3142 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 A0A1W2PS29 197 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 F5H5P2 479 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 H0YC42 278 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 H7C4K7 107 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 ADAM11O75078 769 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 RLN1P04808 185 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 C8orf89P0DMQ9 161 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 NT5EP21589 574 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 TEAD1P28347 426 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 MPGP29372 298 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 MAGEB1P43366 347 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 S100A12P80511 92 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 HENMT1Q5T8I9 393 aaKnown RBP13.34□□□□□ -0.27
SMG6-215ENST00000574501 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 CBLN2Q8IUK8 224 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 C2CD4CQ8TF44 421 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 C2orf15Q8WU43 125 aaKnown RBP13.34□□□□□ -0.27
SMG6-215ENST00000574501 SMPDL3BQ92485 455 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 GLYATL1Q969I3 302 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 SLC25A38Q96DW6 304 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 ARHGDIGQ99819 225 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 PDCD1LG2Q9BQ51 273 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 SLC39A1Q9NY26 324 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 CTSFQ9UBX1 484 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
SMG6-215ENST00000574501 PRRC2BQ5JSZ5 2229 aaKnown RBP13.33□□□□□ -0.27
SMG6-215ENST00000574501 FRMPD3Q5JV73 1810 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 ANKRD20A5PA0PJZ0 165 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 SNRPGP15A8MWD9 76 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 LINC00587B1AMM8 73 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 KIAA0355O15063 1070 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 ITGA10O75578 1167 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 NDUFB6O95139 128 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 CKMP06732 381 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 ASGR1P07306 291 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 SBK2P0C263 348 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 GDI2P50395 445 aaKnown RBP13.33□□□□□ -0.27
SMG6-215ENST00000574501 ART1P52961 327 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 CLDN2P57739 230 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 TAS2R43P59537 309 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 FAM209BQ5JX69 171 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 HAGHLQ6PII5 290 aaPredicted RBP13.33□□□□□ -0.27
SMG6-215ENST00000574501 FAM129CQ86XR2 697 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 CCDC116Q8IYX3 515 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 ARL14Q8N4G2 192 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 TRAM1L1Q8N609 369 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 TEX19Q8NA77 164 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 C1orf216Q8TAB5 229 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 BBS4Q96RK4 519 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.27
SMG6-215ENST00000574501 MS4A8Q9BY19 250 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 SLC19A3Q9BZV2 496 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 SLC25A32Q9H2D1 315 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 SLC38A1Q9H2H9 487 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 FN3KQ9H479 309 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 ADGRL4Q9HBW9 690 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 ACSS1Q9NUB1 689 aaPredicted RBP13.33□□□□□ -0.27
SMG6-215ENST00000574501 ST6GALNAC2Q9UJ37 374 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 MOKQ9UQ07 419 aa13.33□□□□□ -0.27
SMG6-215ENST00000574501 DENND4AQ7Z401 1863 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 ABHD14A-ACY1A0A1B0GW23 586 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 UBE2QL1A1L167 161 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 FCMRO60667 390 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 AQP8O94778 261 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 POP4O95707 220 aaKnown RBP13.33□□□□□ -0.28
SMG6-215ENST00000574501 APOC1P02654 83 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 CLTBP09497 229 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 TYRP1P17643 537 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 PTH2RP49190 550 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 P2RX1P51575 399 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 C11orf88Q6PI97 169 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 GDPD4Q6W3E5 623 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 TRAPPC5Q8IUR0 188 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 CMTM8Q8IZV2 173 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 TMEM185AQ8NFB2 350 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 OR6K3Q8NGY3 331 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
SMG6-215ENST00000574501 PPP1R16AQ96I34 528 aa13.33□□□□□ -0.28
SMG6-215ENST00000574501 C1QTNF2Q9BXJ5 285 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms