RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 NUDT7P0C024 238 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 CD1EP15812 388 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 DNASE1P24855 282 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 DIO1P49895 249 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 GNA13Q14344 377 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 SYT14P1Q58G82 188 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 ALKBH2Q6NS38 261 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 STAC2Q6ZMT1 411 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 GRINAQ7Z429 371 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 FUNDC1Q8IVP5 155 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 PEX5LQ8IYB4 626 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 OR52P1PQ8NH57 321 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 SLC38A5Q8WUX1 472 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 TMEM19Q96HH6 336 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 CCDC106Q9BWC9 280 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 OR11A1Q9GZK7 315 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 PLEKHF2Q9H8W4 249 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 EXOSC3Q9NQT5 275 aaKnown RBP15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 CHRNA9Q9UGM1 479 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 PDZD2O15018 2839 aa15.84■□□□□ 0.13
CTDNEP1-207ENST00000572043 CREBBPQ92793 2442 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 DEFB108AA8MXU0 73 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 SULT2B1O00204 365 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 SMAD9O15198 467 aaKnown RBP15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 TFPTP0C1Z6 253 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 GKN3PP0CG01 181 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 RPS4Y1P22090 263 aaKnown RBP15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 APOBEC1P41238 236 aaKnown RBP15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 CRISP3P54108 245 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 RASGEF1BQ0VAM2 473 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 KEAP1Q14145 624 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 TSC22D1Q15714 1073 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 AGKQ53H12 422 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 AP1ARQ63HQ0 302 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 PAMR1Q6UXH9 720 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 ZNF836Q6ZNA1 936 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 TMPPEQ6ZT21 453 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 BEND4Q6ZU67 534 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 CMIPQ8IY22 773 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 NINJ1Q92982 152 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 MAL2Q969L2 176 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 SPDL1Q96EA4 605 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 MAGEB18Q96M61 343 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 ZNF300Q96RE9 604 aaPredicted RBP15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 SLAMF8Q9P0V8 285 aa15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 SPIN1Q9Y657 262 aaPredicted RBP15.83■□□□□ 0.12
CTDNEP1-207ENST00000572043 CFAP73A6NFT4 308 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 CLIC1O00299 241 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 YES1P07947 543 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 CRYGSP22914 178 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 TACR3P29371 465 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 PCYT1AP49585 367 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 LIN52Q52LA3 116 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 PAGE3Q5JUK9 113 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 BLOC1S3Q6QNY0 202 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 TFAP2EQ6VUC0 442 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 CXorf67Q86X51 503 aaPredicted RBP15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 ADGRG3Q86Y34 549 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 SLC43A2Q8N370 569 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 SLC25A43Q8WUT9 341 aaPredicted RBP15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 ARL5BQ96KC2 179 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 PSD2Q9BQI7 771 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 ACTR6Q9GZN1 396 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 SLC25A37Q9NYZ2 338 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 KLHL9Q9P2J3 617 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 DCTN4Q9UJW0 460 aa15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 ING1Q9UK53 422 aaPredicted RBP15.82■□□□□ 0.12
CTDNEP1-207ENST00000572043 A0A096LPI6 279 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 TMED7-TICAM2A0A0A6YYA0 188 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 TMEM72A0PK05 275 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 TMEM247A6NEH6 219 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 CYTIPO60759 359 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 GOSR1O95249 250 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 RAF1P04049 648 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 THBDP07204 575 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 NCF2P19878 526 aaPredicted RBP15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 MAGEA8P43361 318 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 MRPL19P49406 292 aaKnown RBP15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 POLR2HP52434 150 aaKnown RBP15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 OR2B6P58173 313 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 CSNK2A1P68400 391 aaPredicted RBP15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 EPS8Q12929 822 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 SQLEQ14534 574 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 RGNQ15493 299 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 MED12LQ86YW9 2145 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 WFDC8Q8IUA0 241 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 MSRB3Q8IXL7 192 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 CADM2Q8N3J6 435 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 HS3ST6Q96QI5 342 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 CACYBPQ9HB71 228 aaKnown RBP15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 NPHS2Q9NP85 383 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 FANCFQ9NPI8 374 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 CALML5Q9NZT1 146 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 PRSS50Q9UI38 385 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 OSGIN1Q9UJX0 560 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 EDARQ9UNE0 448 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 ZNF443Q9Y2A4 671 aaPredicted RBP15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 TMED7Q9Y3B3 224 aa15.81■□□□□ 0.12
CTDNEP1-207ENST00000572043 NUP214P35658 2090 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms