RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RAC3	P60763	192 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	PPP2R2A	P63151	447 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	KCNJ10	P78508	379 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	HPCA	P84074	193 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	CHRNE	Q04844	493 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	MERTK	Q12866	999 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	KEAP1	Q14145	624 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	POU4F3	Q15319	338 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	SYPL1	Q16563	259 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	COX20	Q5RI15	118 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	TMEM201	Q5SNT2	666 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	EPGN	Q6UW88	154 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	PAMR1	Q6UXH9	720 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	STAC2	Q6ZMT1	411 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	FRRS1	Q6ZNA5	592 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	LRRC74B	Q6ZQY2	392 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	FCRLA	Q7L513	359 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	CMIP	Q8IY22	773 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC43A2	Q8N370	569 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF563	Q8TA94	476 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	RNF128	Q8TEB7	428 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZFP90	Q8TF47	636 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	ABHD3	Q8WU67	409 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZC3HAV1L	Q96H79	300 aa	Known RBP	6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	MARK4	Q96L34	752 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	OR5B2	Q96R09	309 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	HDHD5	Q9BXW7	423 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	SRXN1	Q9BYN0	137 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	QRSL1	Q9H0R6	528 aa	Known RBP	6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	RMND5A	Q9H871	391 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	SDR39U1	Q9NRG7	319 aa	Predicted RBP	6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZIM2	Q9NZV7	527 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	FLNA	P21333	2647 aa	Known RBP	6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	CSMD2	Q7Z408	3487 aa		6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635	RAI1	Q7Z5J4	1906 aa	Predicted RBP	6.17	□□□□□ -1.42
SF3B3-209	ENST00000567635		A0A1W2PNR3	127 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	FAM234B	A2RU67	622 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	DEFB108A	A8MXU0	73 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	SULT2B1	O00204	365 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	BCAS1	O75363	584 aa	Predicted RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ATE1	O95260	518 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ANP32D	O95626	131 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	DBI	P07108	87 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CHRM4	P08173	479 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	TFPI	P10646	304 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CD99	P14209	185 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	IL7R	P16871	459 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ENPP1	P22413	925 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	AGTR1	P30556	359 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	RYK	P34925	604 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	MDH1	P40925	334 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CRAT	P43155	626 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	HTR3A	P46098	478 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	IDH2	P48735	452 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CLK1	P49759	484 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CSNK2A1	P68400	391 aa	Predicted RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	RASGEF1B	Q0VAM2	473 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	FUT5	Q11128	374 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	GNA13	Q14344	377 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	DEFB113	Q30KQ7	82 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	C3orf33	Q6P1S2	294 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	TMPPE	Q6ZT21	453 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	MSANTD1	Q6ZTZ1	278 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	C22orf34	Q6ZV56	151 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	PLEKHM3	Q6ZWE6	761 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF550	Q7Z398	422 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	NUFIP2	Q7Z417	695 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	MAVS	Q7Z434	540 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	HMGN2P46	Q86SG4	172 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	MTDH	Q86UE4	582 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ADGRG3	Q86Y34	549 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	TGIF2LY	Q8IUE0	185 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	TUSC5	Q8IXB3	177 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	PEX5L	Q8IYB4	626 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	MIER2	Q8N344	545 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ANKFN1	Q8N957	763 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	FAM71C	Q8NEG0	241 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	PNPT1	Q8TCS8	783 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	LRRC8C	Q8TDW0	803 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CNOT9	Q92600	299 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	PIK3IP1	Q96FE7	263 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ITCH	Q96J02	903 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	C7orf26	Q96N11	449 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ALPK1	Q96QP1	1244 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	OR52B2	Q96RD2	323 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CCDC106	Q9BWC9	280 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	OR10A4	Q9H209	315 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC38A1	Q9H2H9	487 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	C12orf49	Q9H741	205 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	COQ10B	Q9H8M1	238 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	EXOSC3	Q9NQT5	275 aa	Known RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	CTPS2	Q9NRF8	586 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	SLC6A13	Q9NSD5	602 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	C6orf203	Q9P0P8	240 aa	Predicted RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	KLHL13	Q9P2N7	655 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	ZNF232	Q9UNY5	417 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	GPR52	Q9Y2T5	361 aa		6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	SPIN1	Q9Y657	262 aa	Predicted RBP	6.16	□□□□□ -1.42
SF3B3-209	ENST00000567635	USH1C	Q9Y6N9	552 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms