RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 OR5M10Q6IEU7 315 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 KCNIP4Q6PIL6 250 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 APOBEC3FQ8IUX4 373 aaKnown RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 SLC38A6Q8IZM9 456 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 CLDN19Q8N6F1 224 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF525Q8N782 197 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 STXBP6Q8NFX7 210 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 OR13F1Q8NGS4 319 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 OR2T3Q8NH03 318 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 ZPLD1Q8TCW7 415 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 RLN3Q8WXF3 142 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 FAM3CQ92520 227 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 CITED1Q99966 193 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 TEX13BQ9BXU2 312 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 NXF5Q9H1B4 397 aaKnown RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF221Q9UK13 617 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 MRPS33Q9Y291 106 aaKnown RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 MMP24Q9Y5R2 645 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 DDX49Q9Y6V7 483 aaKnown RBP3.48□□□□□ -1.85
LINC00560-201ENST00000564593 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 AGLP35573 1532 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 IQSEC2Q5JU85 1478 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 SIGLEC1Q9BZZ2 1709 aa3.48□□□□□ -1.85
LINC00560-201ENST00000564593 TMEM131LA2VDJ0 1609 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 CDC42BPGQ6DT37 1551 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 A0A1W2PNV4 684 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 MBLAC1A4D2B0 266 aaPredicted RBP3.47□□□□□ -1.85
LINC00560-201ENST00000564593 B4DXG7 233 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 K7ENP7 123 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 TPST2O60704 377 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 CCDC166P0CW27 439 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 UGT1A3P35503 534 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 STARP49675 285 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 EFNA3P52797 238 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 MXD4Q14582 209 aaPredicted RBP3.47□□□□□ -1.85
LINC00560-201ENST00000564593 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 FAM71F2Q6NXP2 309 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 C16orf62Q7Z3J2 963 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 PPP1R42Q7Z4L9 355 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 SYT14Q8NB59 555 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 TRMT10AQ8TBZ6 339 aaKnown RBP3.47□□□□□ -1.85
LINC00560-201ENST00000564593 FAF2Q96CS3 445 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 NOL4LQ96MY1 436 aaPredicted RBP3.47□□□□□ -1.85
LINC00560-201ENST00000564593 CYP2S1Q96SQ9 504 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 KIR2DL4Q99706 377 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 ZSCAN5AQ9BUG6 496 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 WRAP73Q9P2S5 460 aaPredicted RBP3.47□□□□□ -1.85
LINC00560-201ENST00000564593 APOBEC3BQ9UH17 382 aaKnown RBP3.47□□□□□ -1.85
LINC00560-201ENST00000564593 RIMS3Q9UJD0 308 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 KLHL21Q9UJP4 597 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 CLEC4EQ9ULY5 219 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 ATP7BP35670 1465 aa3.47□□□□□ -1.85
LINC00560-201ENST00000564593 IGLV3-10A0A075B6K4 115 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 GPR89AB7ZAQ6 455 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 NPIPA7E9PJI5 369 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 OR7A17O14581 309 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 RHOBTB1O94844 696 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 LRATO95237 230 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 H2BFMP0C1H6 154 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 GPR89BP0CG08 455 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 NPIPA8P0DM63 369 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 HNF1AP20823 631 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 P2RY4P51582 365 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 PRR4Q16378 134 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 SBK1Q52WX2 424 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 ATF7IP2Q5U623 682 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 TTC23Q5W5X9 447 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 ZNF677Q86XU0 584 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 MTURNQ8N3F0 131 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 ANKFN1Q8N957 763 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 OR10A7Q8NGE5 316 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 OR51G2Q8NGK0 314 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 SH3YL1Q96HL8 342 aaPredicted RBP3.46□□□□□ -1.85
LINC00560-201ENST00000564593 MS4A14Q96JA4 679 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 C7orf34Q96L11 122 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 C19orf24Q9BVV8 132 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 NANSQ9NR45 359 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 TNFRSF19Q9NS68 423 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 OR1A1Q9P1Q5 309 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 NPIPA1Q9UND3 350 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 PDE10AQ9Y233 779 aa3.46□□□□□ -1.85
LINC00560-201ENST00000564593 AGRNO00468 2067 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 TULP4Q9NRJ4 1543 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 MON2Q7Z3U7 1717 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 RIMS1Q86UR5 1692 aaKnown RBP3.46□□□□□ -1.86
LINC00560-201ENST00000564593 LOC100131303A0A0U1RQF7 123 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 PP2D1A8MPX8 630 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 G3V4G9 280 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 WWP2O00308 870 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 BTN3A3O00478 584 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 STSP08842 583 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 VDAC1P21796 283 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 EPHX2P34913 555 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 HNMTP50135 292 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 SPIBQ01892 262 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 CUL1Q13616 776 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 KIAA0040Q15053 153 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 CCDC152Q4G0S7 254 aa3.46□□□□□ -1.86
LINC00560-201ENST00000564593 C10orf120Q5SQS8 335 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms